Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0032 ATGGCCCTTCCCTGCGACGCCGATGGTCTCTGCATGCTCTGCAAACAGAAGCCCTCCGAGCATGAAGCCCTCATCTGCCACACCTGCAACACTCCCTGGCATCTCCCATGCCTCCCCGCCGCCGCCCGTCCTGCCACCATGTCTGCCGTCGGCGAATGGGTCTGCCCTGACTGCACCGACCTTGACACTCTTGCCCCACCTCCGCCATCCGCCGCTCCTGGCAGTGGACTAGTCGCCACCATACGGGCGATCGAGGAGGACACTTCGTTGACTGAGGCGGAGAAGGCCAAGAAACGTCAGGAGATCGTCGATGGGTCCTCAAAGGCGTCTGCTGCGGAGGAGAAAGGGAAACCGCCGATCAACATCTTCGACGGGAAGCTTAACTGCTCTATCTGCCTGCAACTGCCGGAAAGACCCGTGACGACCCCTTGTGGTCACAACTTTTGTCTGGCGTGCTTCGAGAAGTGGCTTAAGCAAGGTAAGAAAACATGTGCCAATTGTCGTCGTCAGATCCCGCCGAAGATGGCCAGCAATCCTCGGATCAACGATCAGCTCGCCATTGCCATTCGGTTGGCGAGGCAGGTCAGGGCGGGGGTGGCAAGGCCTGTGTCTCAGCCCAAAATGTATGTCAGCATGAAAAACGAGAGCCTTCCGGAGACAGCCTTCACCACTGAGCGAGCAGTGAAGAAAGGGAAGGCCAATGCTTGCAGTGGGAAGATTTTTGTGACGATTCCTGGAGATTTCTTTGGACCAATCACTGCTGAGTATGACCCCAGGAACAATCGTGGGGTTCTGGTTGGGGACAGTTGGGAGGACAGGATGGATTGCAGGCAGTGGGGTGCTCACTTCCCTCATGTTGCTGGCATTGCTGGCCAGAAGAATCATGGAGCTCAGTCTGTTGCACTATCTGGAGGTTACATTGATGATGAGGACCATGGTGAATGGTTCCTCTACACTGGAAGTGGTGGAAAAGACCTCAGTGGCAACAAACGCACCAACAAGCAGCATTCCTTTGACCAGAAGTTTGAGAACATGAATGAGGCACTCAGAGTGAGTTGCAAAGAAGGCTACCCTGTTAGGGTTGTGAGGTCACACAAAGAGAAACGTTCTTCATATGCACCTCAATTTGGAGTGAGGTATGACGGAGTTTATAGAATAGAGAAGTGTTGGCGTAAGAAGGGAGTACAAGGCTGCTTGGTTTGTAGATATTTGTTCGTTAGATGTGACAATGAGCCAGCCCCATGGACAAGTGATGAAAGTGGAGACCGCCCACGCCCATTGCCTGTAGTTAAAGAGCTGAAGGGAGCAATTGACATAACTGAGAGGAAGAAGGCCCCAGCATGGGATTTTGATGAGGAAAAGGGCTGCTGGGTGTGGATGAGACCACAACCAGAAAGCAAGAAATCGGAAGCTCCAAAGACTTTTGATGGGACAGAAAAGATAATGCCTGTAAGAAGAAAAATTAAGAGTCTGCCAGTGAAAGACAGGCTTAAGAGAGAGTTTGGTTGCCTATTGTGTCGCAACCTGTTAACAATCCCTGTAACCACACCTTGCGGTCATAACTTCTGCAAAGCCTGTCTGGAGGGTGCCTTTTCTGGCCAAACTTTCATAAGACAAAGGGCAAGCAAAAGTGGACGTGCCTTGCGAGAACAGAAGAATGTTATGAAATGCCCCTCATGTCCATGTGACATTGCTGAATTTCTTCAGAACATTGAGGTTAACAGAGAAATGACTGCTGTGATAGAGACACTGATGCGGGAGGCTGAGGATGAGATGGAGCAGAGTTCTGAAGAGGCAATTGAGGAAAAGAATGAGGATGATGCTGATGGGTCAGGGGATTCAACGGCTTGTGATTCAGGTGAGAAGGATTTGGAAGAGGAAGTTAAGGAGAAGGAGGAGGAGGATGATCAGAACAAGCCAAAGAAGCGGAGGAAGTGTGCTGTTAAGGAGGCAGCGGCAGTACCAGAAGAGGACACAACTGTCATGGCTTGCAACTAG 1998 0.514 MALPCDADGLCMLCKQKPSEHEALICHTCNTPWHLPCLPAAARPATMSAVGEWVCPDCTDLDTLAPPPPSAAPGSGLVATIRAIEEDTSLTEAEKAKKRQEIVDGSSKASAAEEKGKPPINIFDGKLNCSICLQLPERPVTTPCGHNFCLACFEKWLKQGKKTCANCRRQIPPKMASNPRINDQLAIAIRLARQVRAGVARPVSQPKMYVSMKNESLPETAFTTERAVKKGKANACSGKIFVTIPGDFFGPITAEYDPRNNRGVLVGDSWEDRMDCRQWGAHFPHVAGIAGQKNHGAQSVALSGGYIDDEDHGEWFLYTGSGGKDLSGNKRTNKQHSFDQKFENMNEALRVSCKEGYPVRVVRSHKEKRSSYAPQFGVRYDGVYRIEKCWRKKGVQGCLVCRYLFVRCDNEPAPWTSDESGDRPRPLPVVKELKGAIDITERKKAPAWDFDEEKGCWVWMRPQPESKKSEAPKTFDGTEKIMPVRRKIKSLPVKDRLKREFGCLLCRNLLTIPVTTPCGHNFCKACLEGAFSGQTFIRQRASKSGRALREQKNVMKCPSCPCDIAEFLQNIEVNREMTAVIETLMREAEDEMEQSSEEAIEEKNEDDADGSGDSTACDSGEKDLEEEVKEKEEEDDQNKPKKRRKCAVKEAAAVPEEDTTVMACN* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0032 665 Coils Coil 574 605 - -
Aev07g0032 665 SUPERFAMILY FYVE/PHD zinc finger 4 60 IPR011011 -
Aev07g0032 665 ProSiteProfiles Zinc finger RING-type profile. 503 560 IPR001841 -
Aev07g0032 665 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 485 609 IPR013083 -
Aev07g0032 665 MobiDBLite consensus disorder prediction 89 111 - -
Aev07g0032 665 SMART ring_2 503 560 IPR001841 -
Aev07g0032 665 SMART ring_2 129 167 IPR001841 -
Aev07g0032 665 SMART ring_2 11 58 IPR001841 -
Aev07g0032 665 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 2 659 - -
Aev07g0032 665 MobiDBLite consensus disorder prediction 633 652 - -
Aev07g0032 665 MobiDBLite consensus disorder prediction 587 665 - -
Aev07g0032 665 ProSitePatterns Zinc finger PHD-type signature. 11 58 IPR019786 -
Aev07g0032 665 SMART G9a_1 254 411 IPR003105 -
Aev07g0032 665 ProSiteProfiles Zinc finger PHD-type profile. 8 61 IPR019787 -
Aev07g0032 665 ProSiteProfiles YDG domain profile. 259 407 IPR003105 -
Aev07g0032 665 Pfam RING-type zinc-finger 503 544 IPR027370 -
Aev07g0032 665 MobiDBLite consensus disorder prediction 591 612 - -
Aev07g0032 665 ProSitePatterns Zinc finger RING-type signature. 518 527 IPR017907 -
Aev07g0032 665 Pfam Zinc finger, C3HC4 type (RING finger) 127 171 - -
Aev07g0032 665 ProSiteProfiles Zinc finger RING-type profile. 129 168 IPR001841 -
Aev07g0032 665 SUPERFAMILY RING/U-box 495 586 - -
Aev07g0032 665 SMART PHD_3 10 59 IPR001965 -
Aev07g0032 665 SUPERFAMILY PUA domain-like 233 427 IPR015947 -
Aev07g0032 665 Pfam SAD/SRA domain 261 410 IPR003105 -
Aev07g0032 665 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 193 IPR013083 -
Aev07g0032 665 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 68 IPR013083 -
Aev07g0032 665 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 2 659 IPR045134 -
Aev07g0032 665 SUPERFAMILY RING/U-box 122 176 - -
Aev07g0032 665 MobiDBLite consensus disorder prediction 89 117 - -
Aev07g0032 665 CDD RING-HC 129 167 - -
Aev07g0032 665 Gene3D - 230 428 IPR036987 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0032 3 595 C2H2 Transcription Factor Family AT5G39550 59.375 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0032 K10638 - gmx:100786796 847.425