Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0025 ATGGAGGATGAGATGCAACAGCTCTTGAGCATGGGCTTCCCGGACGAGTTAGCCGCCCAAGCATTGGCTGCCACCGGCGGCAAATCCACCGTCAAAGCCACCGAATGGATTCTCACCCACCACAAATCCAACCCACCTCCTCCTCAACCCCCCTTTCAGCCAAAGCTTGACCGCTTCTTCCTCTCCCAACCCAAGCATTCCACGCCCCCACCACCACCACCAGTCGACCTAGAACAAGAAGAAGACGACGACGCAGCTCCACTATCCAAGCGCCCCAGACCACTGCCCTCATCCACCTCCACGCCTCAATCTTCCTTCTTCTTCAATCCCCTCCGTCACTCCAAGAAACAATCCCACGAACCCTTATACGAGCGCCTCCGCCCCAAGACCTTGGACGACGTCGTTGGACAGGACCATCTCCTTTCATCCAATTCCCTCCTCCGCTCCGCCATCCAGCGCAACCGCCTCCCTTCCATCCTCCTCTGGGGTCCCCCTGGCACAGGCAAAACCACCATCGCCAGAGCCATCGTCAACTCCTGTCACAAACAGCAGCAGCAGCAATGCCCTTGTTACCGCTTCGTTTCCCTGTCCGCTGTGACCAGTGGCGTCAAAGACGTGAGGGACGCTGTTGATGAAGCTAGGAAGCTCAGGGTCAAGAACAACCAGAGAACCGTTCTGTTTGTGGATGAGGTTCACAGGTTCAACAAGTCTCAGCAAGACTCGTTCTTACCCGTCATTGAAGATGGCAGCATTGTGTTCGTTGGAGCCACCACTGAGAACCCTTCTTTCCATTTGATCACGCCCCTCTTGTCTCGATGCCGCGTCCTCACCCTTAACCCTCTCAAGCCCCACCATGTTTCATTGCTCCTGAACAGAGCAGTGGGCGACTCCGAGAGAGGCTTGGTGCAGAGCGTTGGCTGCATAGTTGATGTGAGCGAGGATGTGGTGGATTTTATAGGCAGCAACTGTGATGGGGATGCTCGTGTGGCCTTGAATGCTTTGGAGATTGCTGCTGTCACTGCAGCTGCACGTGTGCAGCATCATGTGAAGGAGGAGGAAAACCACACAAAAAACGAGGAGCACAAGGTTGGTCTTGTTCCATCTTCTGCTGCTGCTGCTGTTACCCTTGATGATGCAAAGGAGGCACTTCAGTGCAAGCATCTTGCTTATGATAAGGATGGGGAAGAGCACTACAATCTGATTAGTGCCCTGCATAAATCCATGAGAGGGAGTGATGCTAATGCAGCCATTTATTGGCTGGCAAGAATGCTGGAAGGGGGTGAAGAGCCACTCTACATTGCAAGAAGGCTCATAAGGTTTGCAAGCGAGGATGTTGGTCTGGCAGATCCTTCAGCTCTTACTCAGGCTGTTTCGTGCTACCAAGGCTGCCACTTCCTGGGGATGCCAGAGTGCAATGTCATTCTTGCGCAGTGTGTGGCTTACTTGGCATTGGCTCCTAAGTCCGTATCGGTTTACAGAGCAATTGGAGCTGCTCAGAAGGTAGTGAGGGAGTCGGTTGGACAGAATGAAGGGGTGCCCCTTCATCTGAGGAATGCGCCAACCAAATTGATGAAGGAAATAGGGTATGGGAAGGGATACATATACCCTCCTGACAATCCCTCCTCAGCACAGAGCTATTTGCCACCCTCACTTGAAGGCTACAAGTTCCTCGATTGGCCCTAG 1683 0.5354 MEDEMQQLLSMGFPDELAAQALAATGGKSTVKATEWILTHHKSNPPPPQPPFQPKLDRFFLSQPKHSTPPPPPPVDLEQEEDDDAAPLSKRPRPLPSSTSTPQSSFFFNPLRHSKKQSHEPLYERLRPKTLDDVVGQDHLLSSNSLLRSAIQRNRLPSILLWGPPGTGKTTIARAIVNSCHKQQQQQCPCYRFVSLSAVTSGVKDVRDAVDEARKLRVKNNQRTVLFVDEVHRFNKSQQDSFLPVIEDGSIVFVGATTENPSFHLITPLLSRCRVLTLNPLKPHHVSLLLNRAVGDSERGLVQSVGCIVDVSEDVVDFIGSNCDGDARVALNALEIAAVTAAARVQHHVKEEENHTKNEEHKVGLVPSSAAAAVTLDDAKEALQCKHLAYDKDGEEHYNLISALHKSMRGSDANAAIYWLARMLEGGEEPLYIARRLIRFASEDVGLADPSALTQAVSCYQGCHFLGMPECNVILAQCVAYLALAPKSVSVYRAIGAAQKVVRESVGQNEGVPLHLRNAPTKLMKEIGYGKGYIYPPDNPSSAQSYLPPSLEGYKFLDWP* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0025 560 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 1 40 IPR015940 -
Aev07g0025 560 SUPERFAMILY UBA-like 2 49 IPR009060 GO:0005515
Aev07g0025 560 Gene3D - 384 487 - -
Aev07g0025 560 CDD AAA 150 274 - -
Aev07g0025 560 Pfam AAA C-terminal domain 309 409 IPR032423 -
Aev07g0025 560 Gene3D - 488 559 - -
Aev07g0025 560 CDD HLD_clamp_RarA 281 352 - -
Aev07g0025 560 Pfam ATPase family associated with various cellular activities (AAA) 159 275 IPR003959 GO:0005524|GO:0016887
Aev07g0025 560 SUPERFAMILY post-AAA+ oligomerization domain-like 394 557 IPR008921 GO:0003677|GO:0006260
Aev07g0025 560 MobiDBLite consensus disorder prediction 93 110 - -
Aev07g0025 560 SMART AAA_5 155 281 IPR003593 -
Aev07g0025 560 Gene3D - 1 55 - -
Aev07g0025 560 PANTHER WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER 17 559 - -
Aev07g0025 560 MobiDBLite consensus disorder prediction 36 110 - -
Aev07g0025 560 Pfam MgsA AAA+ ATPase C terminal 410 556 IPR021886 -
Aev07g0025 560 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 353 IPR027417 -
Aev07g0025 560 Gene3D - 111 279 IPR027417 -
Aev07g0025 560 Gene3D - 281 355 - -
Aev07g0025 560 SMART uba_6 1 39 IPR015940 -
Aev07g0025 560 Pfam UBA/TS-N domain 3 37 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0025 Aev-Chr7 209871 211553 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0025 121 360 Core DNA Replication Machinery Family AT1G77470 27.419 6.07e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0025 K07478 - gmx:100799257 799.275