Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0020 ATGGAAAACAGTAACAGAGTTGCAGGTGCTGAGATTCAGCTTCAAACTGACGCTGCTGCTTTTGTATCAGATCCTAAAGCTCATCATCTCCAGTCGAGACGGCCTACCCTCTCCTCTCTGCAAATTCCGACATGGTCATTAGATGTGGCATTGTCTTCTTTTGCAAAGACGGATGGTCCTTCACTCTCGAGTCCCGGTTCTGCTACCACTAGAGGGCTTCCCCCGAGGCCAAATTCAGCCAGAGTCAGGTCTTCCATGAGAAGTTTTCTTCCCCAGGGGAGCTTCAGGGTAAGAACTACTCCCCGAGATTGCGAAAAGACAGTTCTCATATTTCCTAATACTCCCTCCTCCGATGTTCCTTTGGATAAGCCTTCTACTTCAAGGTCCCTCTCCGTTAATGGGAAGGGTTTATTCTCTCCATCAGCAAAGGCTGCACATTCGCTACCGGTTACACCAAAGGCAACTTCAGGAGCAGAGATTGCACATGGCAGGCATCTAGGGTGCAATTCTGATTTAAGTACAATGGATGCTAAGCACCATATAACTCGATCACTCTCAGTTCCAGTTGATGGCAAAGCCATTAATTTAAGGCGTACAGATTCTAGGGTCTTGGTTCGTGTAATTTCAGCAAAACCACTTAGTGAAACTGCTGATGGAACTTCAACTGGTGATTCTTCAGTTTTGGAGATAGCCACTGAGGATGCTACCGAGGATATTCCAGAGGAAGAAGCAGTTTGTAGGATTTGTTTGGCAGAGCTTGGGGAAGGAGGGAATACTCTTAAGATGGAATGCAGTTGTAAAGGTGATCTTGCACTTGCTCACCAAGACTGTGCAGTAAAGTGGTTTAGTATTAAAGGAAACCGGACCTGTGATGTCTGCAAGCAGGATGTTCAAAACCTCCCAGTAACACTGTTGAAAATTTATAGTCATCAAGCTCCTGTCGTGCAGTCTTCAAGTATGCCACAAGTCCCACAACAGAGAGAAGTAATTCATTACAGGATCTGGCAGGACGTACCAGTACTTGTCTTGGTCAGCATGCTTGCTTACTTTTGCTTTTTGGAGCAACTACTGGTTTCAGATTTGGGCCCTCGTGCTCTAGCCATTGCATTGCCTTTCTCGTGCGTTTTAGGTCTGCTTTCATCTATGATTGCATCAACCATGGTGAGCAGGAGTTTCATATGGGCTTATGCTTGCTTCCAGTTTGCAATTCTAATCCTGTTTGCTCACGTCTTTTACAATATCCTGAACGTGAATGCAATTCTGTCCATTCTGCTTTCGTCGTTCACTGGATTTGGGATCACAATCAGCATTAACACACTCCTTATGGAGTATATAAGATGGAAAGCAAGCAGGCAGGTGGTTCAATCACCCAATGCCTCTCAGAATGTTGTTAACAGGACACAGCAGCGGCATGCTCATCGTCTCCAACAGGATGAGCATCATCATCATCAACGCCAAAGACAGCAGCAAGAGCAACATCGATGA 1485 0.4566 MENSNRVAGAEIQLQTDAAAFVSDPKAHHLQSRRPTLSSLQIPTWSLDVALSSFAKTDGPSLSSPGSATTRGLPPRPNSARVRSSMRSFLPQGSFRVRTTPRDCEKTVLIFPNTPSSDVPLDKPSTSRSLSVNGKGLFSPSAKAAHSLPVTPKATSGAEIAHGRHLGCNSDLSTMDAKHHITRSLSVPVDGKAINLRRTDSRVLVRVISAKPLSETADGTSTGDSSVLEIATEDATEDIPEEEAVCRICLAELGEGGNTLKMECSCKGDLALAHQDCAVKWFSIKGNRTCDVCKQDVQNLPVTLLKIYSHQAPVVQSSSMPQVPQQREVIHYRIWQDVPVLVLVSMLAYFCFLEQLLVSDLGPRALAIALPFSCVLGLLSSMIASTMVSRSFIWAYACFQFAILILFAHVFYNILNVNAILSILLSSFTGFGITISINTLLMEYIRWKASRQVVQSPNASQNVVNRTQQRHAHRLQQDEHHHHQRQRQQQEQHR* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0020 494 Pfam RING-variant domain 246 293 IPR011016 GO:0008270
Aev07g0020 494 SUPERFAMILY RING/U-box 242 297 - -
Aev07g0020 494 PANTHER OS02G0165000 PROTEIN 21 470 - -
Aev07g0020 494 CDD RING_CH-C4HC3_MARCH 246 294 - -
Aev07g0020 494 MobiDBLite consensus disorder prediction 471 494 - -
Aev07g0020 494 MobiDBLite consensus disorder prediction 465 494 - -
Aev07g0020 494 ProSiteProfiles Zinc finger RING-CH-type profile. 238 300 IPR011016 GO:0008270
Aev07g0020 494 MobiDBLite consensus disorder prediction 56 74 - -
Aev07g0020 494 MobiDBLite consensus disorder prediction 56 81 - -
Aev07g0020 494 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 230 301 IPR013083 -
Aev07g0020 494 SMART ringv_2 245 294 IPR011016 GO:0008270
Aev07g0020 494 PANTHER OS02G0165000 PROTEIN 21 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0020 Aev-Chr7 192545 196110 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0020 229 300 C3H Transcription Factor Family AT2G37950 46.575 1.61e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0020 - - ahf:112765571 671.774