Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0010 ATGGAATACGGTGGTGGTGCGGCGTTAGTGCAGAATAATAATAGTAGCAATTCTTCAGCGGCGGGGTTTGGGAGCATGGCGGAGTCAGCACCAGGAGAAGTAGGAGACTTGATCGATGAGCTGCTGGTAGAAGGATGCTGGCTGGAGACCACAGCGGGAGGTGGTGGGTCCTACAACATGATGCACCCATCATCGTGTGACGACCTCGGACAGGCACAGGCACAGTACTACATGCCAGCAACTAGTACTGTTAATTATAACAATAACACCGGCTGTGATGATGATCAGATAATAATGATGTTGCAACAAGAGTCAGAGGAGAGCTTTGTGGTGGGGAAGAGATGGTGGATTGGGCCGAGGGGGATCCCTGGAGGAGGAGGGCCGACTTCCTCGGTGAAGGAGAGGCTGGTGGTTGCGGTGGGATACTTGATCAAAGAGTACTACTACACCACTAATAAGACCAATAATAATAATAATAATGTCCTGATTCAGGTATGGGTGCCCCCTCGCTGCAGGTCATCAGCAGTACTTGAGATCATACCCCACTACCACAGATTATCAATTAATCAGGATCAGGATCAGGATCATGAGGCGGTTGCTTTTCCCAACACCAACACAAACCCTAACAACAACTACTACTACGTTCGGTTGTTGAGATCATACCCCCCTCGCCTTCATCAGTACGATGCCCCTCGTGGATCTTTGGCACTTCCTCTCCTCGAACGCGGAACTGGGGCATGCCTTGGTGTCCTCGACATTCTCATCCCCAACAATAACTATCACCCACACCTACTGCCGCTTGACAATGCCCTCCAGGCTGTTGATTATAGAAGCTGCCATCAGAACTTCATTGTTCCACCATCACCTGCGGTGAAGGTATTTGAGGAGTTGTACCAGGCGGCAGTGAACGAGATAGTAGAGGTGATGACGTCGGTGTGCAAGACGCAGAACTTGCCATTAGCGCTGACATGGGCTCCATGCGTGCAGCAAGAAGGCAAGTGCGGCGGGGGGTGCGTGTCCACGGTGGACTCGGCGTGGTTTGTGGGGGACCTGCAAATGCTGGGCTTCCAGGAGGCGTGCTCGGAGTGCCACCTGCTGAGGGGCCAGGGGATAGTAGGGACGGCCCTCACAACCGCCAAGCCCTGCTTCGCAATGGACATTACGGCCTTCAGCAAAGCGGAGTACCCTCTGTCCCACCACGCCGCCCTCTTCGGCCTGCACGCAGCAGTGGCCATCCCCTTCCGCAGTGTCTACACCGGTTCAGCCGCAGACTTCGTGTTGGAGTTTTTCCTGCCAAAGGAGTGCCGTGACGGCGCCGAGCAGAAGCACTTGCTCAATTCACTCTCCATCCTCGTCCAGCAGGCTTGCCGCACCTTGCACGTTGCCACTTCTACTGCTACCGACCACCACCTGCTGCTCGATGACGAGGCCGACTTCACGCTGCCCCCGCCAACACCAGCGGCAGACAACCACAAGCTGCAGCAACTGTTCGCGGAGGAGGAGGAGGAGGAGGAGGCCAAGGAATCATCGTCGTCGATTACGGCCACGTCGTGGATAGCGCACATGATGGAGGCGCAGGGGCAACAGAACAAGGGGAAAGGGGTGTGCGTGTACCAGCTGGAGGATCCAAAAGAGGAGTTCAAGGTCACCACCAACTGGGACGCCGCCACTAGCCAGAGCACCCACCACCTCCACTTCACCTCATCCGATTTCGGCCACATTGACCACACTTCCGCCTCTGCCTCATTAGGCTCAGCGAGCGCCGACGGTGGTCTGGATCAGCAGGACTCTTATGCTGCTGCTGCTGCTGCATTTGGCGGCCGCCGCTCATCCTCTGCCACCTCCGGAGGTGGCAGAAAGTCAGGCGACAAGAGACGAACCAAGGCCGAGAAGACTATCAGCTTGCCTGTCCTCCGACAGTACTTTGCCGGAAGCCTCAAAGACGCTGCCAAGAGCATTGGCGTGTGTCCAACAACTCTGAAAAGGATATGCAGGCAGCACGGGATAACGAGGTGGCCTTCGAGGAAAATAAAGAAGGTAGGGCACTCTCTGAAGAAACTTCAGCTGGTGATAGATTCAGTGCAGGGAGCAGAGGGTGCCATCCAGATTGGGTCCTTCTATGCCAGCTTTCCCGAGTTGGGCTCCGCAGATTTCTCCTCATCATCATCACCAACTACCACTGCCCGATCCAGCCAGCCATCAAAGAAAGCACCGCCCAACTCCTTAAAGTCCGCCGCTGCAGCAGCCTCAGCATCATGCACCAGCCAGACTACTGCTGCTTTTGGTGCGGCAAACCACCACCTCCATCACCATCACCACCACCACCACCACCAGCAGGCTAATAATCCCACTGCTGTGATGATGACGATGACCGAAAGCTGCGATGCTGCTGCAGCTGCAGAGTTGCAGCAGCAGCAGCATGCATCGTCATCAATGCTAATCCAAGAGGGTGAGGGGGAGGGGGAGGAGGAGGAGGACACGAAGAAGCACTTCGCATGGAGGGGTCATGGTGCTTTCAGGGTGAAGGCTACTTTTGTGGACGAGAAGATCCGTTTCAGCTTGCAACAAAATTGGGGGTTCAGGGATTTGCAGGTAGAGATTGCAAGGCGTTTCAATCTAAACGACATAAGCAACATGGACCTCAAGTATTTGGATGACGATGGCGAGTGGGTCCTCTTAGCATGCGATGCAGATCTCCACGAATGTAAAGACATACACACATCATCTCAGACCCGCACTATCAGGCTCTCACTCTTTCCCTCCACCTGCCCCCCATCCTAA 2781 0.5502 MEYGGGAALVQNNNSSNSSAAGFGSMAESAPGEVGDLIDELLVEGCWLETTAGGGGSYNMMHPSSCDDLGQAQAQYYMPATSTVNYNNNTGCDDDQIIMMLQQESEESFVVGKRWWIGPRGIPGGGGPTSSVKERLVVAVGYLIKEYYYTTNKTNNNNNNVLIQVWVPPRCRSSAVLEIIPHYHRLSINQDQDQDHEAVAFPNTNTNPNNNYYYVRLLRSYPPRLHQYDAPRGSLALPLLERGTGACLGVLDILIPNNNYHPHLLPLDNALQAVDYRSCHQNFIVPPSPAVKVFEELYQAAVNEIVEVMTSVCKTQNLPLALTWAPCVQQEGKCGGGCVSTVDSAWFVGDLQMLGFQEACSECHLLRGQGIVGTALTTAKPCFAMDITAFSKAEYPLSHHAALFGLHAAVAIPFRSVYTGSAADFVLEFFLPKECRDGAEQKHLLNSLSILVQQACRTLHVATSTATDHHLLLDDEADFTLPPPTPAADNHKLQQLFAEEEEEEEAKESSSSITATSWIAHMMEAQGQQNKGKGVCVYQLEDPKEEFKVTTNWDAATSQSTHHLHFTSSDFGHIDHTSASASLGSASADGGLDQQDSYAAAAAAFGGRRSSSATSGGGRKSGDKRRTKAEKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKVGHSLKKLQLVIDSVQGAEGAIQIGSFYASFPELGSADFSSSSSPTTTARSSQPSKKAPPNSLKSAAAAASASCTSQTTAAFGAANHHLHHHHHHHHHQQANNPTAVMMTMTESCDAAAAAELQQQQHASSSMLIQEGEGEGEEEEDTKKHFAWRGHGAFRVKATFVDEKIRFSLQQNWGFRDLQVEIARRFNLNDISNMDLKYLDDDGEWVLLACDADLHECKDIHTSSQTRTIRLSLFPSTCPPS* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0010 926 MobiDBLite consensus disorder prediction 718 743 - -
Aev07g0010 926 PANTHER PROTEIN NLP2 38 921 - -
Aev07g0010 926 Pfam RWP-RK domain 633 680 IPR003035 -
Aev07g0010 926 CDD PB1_NLP 839 920 IPR034891 -
Aev07g0010 926 Pfam PB1 domain 839 920 IPR000270 GO:0005515
Aev07g0010 926 SUPERFAMILY CAD & PB1 domains 834 924 - -
Aev07g0010 926 MobiDBLite consensus disorder prediction 799 828 - -
Aev07g0010 926 Gene3D - 836 924 - -
Aev07g0010 926 ProSiteProfiles PB1 domain profile. 838 921 IPR000270 GO:0005515
Aev07g0010 926 PANTHER PROTEIN NLP8 38 921 IPR045012 GO:0003700
Aev07g0010 926 MobiDBLite consensus disorder prediction 799 813 - -
Aev07g0010 926 ProSiteProfiles RWP-RK domain profile. 619 700 IPR003035 -
Aev07g0010 926 SMART PB1_new 838 921 IPR000270 GO:0005515
Aev07g0010 926 MobiDBLite consensus disorder prediction 608 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0010 Aev-Chr7 119129 122898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0010 21 918 NLP Transcription Factor Family AT4G35270 38.330 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aev07g0010 PB1 6.7e-16 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0010 - - aip:107633985 827.78