Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0003 ATGGGCAACACATGCCGCGGATCTTTGAAAGGAAAATATATTCAGGGCTTCAGTCAGCCCGAAGACCATTCCAAACGCAACACTCCATCTGATCGCTCCGACTCAGAACATCACCAGTACCACCTTGCTAAACAGAATCCGAACTCAGCAGATAACATTGGTTGCGGCGACAACAATAACAGCAGCAACAATCCACCCTTCAAGAAGGACACCATCATGCGCCGAGGCCTTGATAACCAAGCGTATTATGTCCTGGGCCACAAGACTCCCAACATCCGTGATCTGTACACTCTTGGCCGTAAGCTGGGGCAGGGGCAATTTGGCACCACCTATTTATGCACTGAGAATTCCACCAACATCGAATATGCATGCAAATCCATCTCCAAGAGGAAGTTGATTTCCAAGGAAGATGTGGAGGACGTTAGGAGGGAAATTCAGATAATGCACCATTTAGCTGGTCACAAGAACATTGTCACTATCAAGGGTGCTTATGAGGATCCCCTCTATGTTCATATTGTCATGGAGCTCTGTTCTGGGGGCGAGTTGTTTGACCGCATCATCCAGAGGGGCCACTACACCGAGAGGAAGGCTGCAGAATTGACCAAAATTATTGTTGGAGTTGTTGAGGCATGCCATTCCCTCGGGGTTATGCATAGAGATCTTAAGCCTGAAAACTTTCTGCTGGTCAATAAGGATGATGATTTCTCTCTTAAAGCAATTGATTTTGGCCTCTCTGTTTTCTTCAAACCAGGTCAAATTTTCACTGATGTTGTTGGCAGCCCGTACTATGTTGCTCCTGAGGTTCTCCTCAAGCATTATGGGCCTGAAGCAGATGTGTGGACAGCAGGTGTTATACTTTACATATTACTTAGTGGAGTGCCACCATTTTGGGCAGAAACCCAGCAGGGTATATTTGATGCTGTTTTGAAGGGACATATAGATTTTGACTCAGATCCGTGGCCTCTGATATCTGATAGTGCCAAAGGTCTAATTAGAAAGATGTTGTCTTCTCGGCCTTCAGAACGGTTAACGGCTCATGAAGTGTTATGCCATCCATGGATTTGTGAAAATGGAGTTGCCCCTGACAGAGCACTGGACCCTGCTGTTCTTTCTCGTCTCAAACAGTTCTCTGCAATGAACAAGCTAAAGAAGATGGCTTTGCGGGTAATTGCTGAAAGTTTGTCCGAAGAGGAGATTGCTGGTTTGAGAGAAATGTTTCAGGCTATGGATACTGATAACAGTGGTGCAATCACTTTTGATGAACTCAAGGCTGGTCTAAGAAGATATGGGTCTACCCTTAAGGATACAGAGATACGTGATCTTATGGAAGCGGCTGATGTGGACAACAGTGGAACTATAGATTATGGGGAGTTTATTGCTGCAACAATTCATCTCAACAAACTAGAGCGTGAGGAACATCTAATTGCTGCATTCCAATATTTTGACAAGGATGGAAGTGGTTATATTACTGTTGATGAACTCCAACAAGCTTGTGTAGAACATAACATGACTGACGTTTTTCTTGAAGATATTATTAGGGAAGTTGATCAAGATAATGATGGAAGGATCGATTATGGTGAGTTTGCTGCCATGATGCAAGGAAATGCTGGAATTGGAAGGAGGACTATGAGGAACAGTCTGAATTTGAGCATGAGAGATGCACCAAGTGCTCATTAG 1677 0.4436 MGNTCRGSLKGKYIQGFSQPEDHSKRNTPSDRSDSEHHQYHLAKQNPNSADNIGCGDNNNSSNNPPFKKDTIMRRGLDNQAYYVLGHKTPNIRDLYTLGRKLGQGQFGTTYLCTENSTNIEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDPLYVHIVMELCSGGELFDRIIQRGHYTERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQIFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISDSAKGLIRKMLSSRPSERLTAHEVLCHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADVDNSGTIDYGEFIAATIHLNKLEREEHLIAAFQYFDKDGSGYITVDELQQACVEHNMTDVFLEDIIREVDQDNDGRIDYGEFAAMMQGNAGIGRRTMRNSLNLSMRDAPSAH* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0003 558 SMART efh_1 473 501 IPR002048 GO:0005509
Aev07g0003 558 SMART efh_1 507 535 IPR002048 GO:0005509
Aev07g0003 558 SMART efh_1 401 429 IPR002048 GO:0005509
Aev07g0003 558 SMART efh_1 437 465 IPR002048 GO:0005509
Aev07g0003 558 Gene3D Transferase(Phosphotransferase) domain 1 182 363 - -
Aev07g0003 558 ProSiteProfiles EF-hand calcium-binding domain profile. 433 468 IPR002048 GO:0005509
Aev07g0003 558 ProSiteProfiles Protein kinase domain profile. 96 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev07g0003 558 ProSitePatterns EF-hand calcium-binding domain. 516 528 IPR018247 -
Aev07g0003 558 ProSiteProfiles EF-hand calcium-binding domain profile. 397 432 IPR002048 GO:0005509
Aev07g0003 558 MobiDBLite consensus disorder prediction 1 70 - -
Aev07g0003 558 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 4 58 541 - -
Aev07g0003 558 Gene3D - 364 535 - -
Aev07g0003 558 ProSitePatterns EF-hand calcium-binding domain. 410 422 IPR018247 -
Aev07g0003 558 SUPERFAMILY EF-hand 378 535 IPR011992 -
Aev07g0003 558 SMART serkin_6 96 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev07g0003 558 ProSitePatterns Protein kinases ATP-binding region signature. 102 125 IPR017441 GO:0005524
Aev07g0003 558 ProSiteProfiles EF-hand calcium-binding domain profile. 469 504 IPR002048 GO:0005509
Aev07g0003 558 Gene3D Phosphorylase Kinase; domain 1 98 181 - -
Aev07g0003 558 ProSiteProfiles EF-hand calcium-binding domain profile. 508 538 IPR002048 GO:0005509
Aev07g0003 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Aev07g0003 558 ProSitePatterns EF-hand calcium-binding domain. 446 458 IPR018247 -
Aev07g0003 558 SUPERFAMILY Protein kinase-like (PK-like) 79 378 IPR011009 -
Aev07g0003 558 MobiDBLite consensus disorder prediction 24 41 - -
Aev07g0003 558 PANTHER SERINE/THREONINE-PROTEIN KINASE 58 541 - -
Aev07g0003 558 ProSitePatterns EF-hand calcium-binding domain. 482 494 IPR018247 -
Aev07g0003 558 Pfam EF-hand domain pair 402 462 IPR002048 GO:0005509
Aev07g0003 558 Pfam EF-hand domain pair 472 533 IPR002048 GO:0005509
Aev07g0003 558 MobiDBLite consensus disorder prediction 42 68 - -
Aev07g0003 558 Pfam Protein kinase domain 96 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev07g0003 558 CDD STKc_CAMK 96 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0003 Aev-Chr7 28743 33000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0003 1 554 EF-hand Containing Proteins AT4G35310 83.333 0.0 952
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aev07g0003 Pkinase 6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0003 K13412 - gmx:100778173 1012.68