Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3861 ATGGCCGGCATAGACTTGGGCTCAGCATCGCACTTTGTTCATCATCATCACCACCTTCAACGCCCTGACCTTGAAGATGACGACCAAGATGGGAGCAGCAACGATGCCCTTGACCTAGTCAGCCCCACTCAGGGTGGCCCCGGGGGCGATGTCGCTGCTCGCCGCCCGAGGGGTAGGCCGCCGGGCTCCAAGAACAAGCCCAAGCCACCGGTCATCATCACGAGGGAGAGTGCCAACACCCTTAGGGCTCACATCCTCGAAGTCAGCAGCGGCTGTGATGTCTTCGATTCTGTGGCCACCTATGCAAGGAAGCGCCAGAGAGGGATCTGCGTCCTCAGTGGCAGCGGAACCGTCACCAACGTCACCCTCCGGCAGCCTGCAGCGGCCGGAGCCGTGGTGACGCTTCACGGGAGGTTTGAGATCCTGTCCCTCTCAGGGTCGTTCCTGCCGCCCCCGGCTCCACCGGGGGCGACTAGCCTGACAGTGTTCCTGGGAGGGGGTCAGGGTCAAGTTGTTGGAGGCAATGTTGTTGGGGCTTTGGTGGCCTCAGGGCCGGTTATTGTGATTGCGTCTTCATTCACGAATGTGGCGTACGAGAGGCTGCCGTTGGAGGAGGATGAGGCTCTTCAGATGGCGCCTCAAGGGCAATCATCTGGCGGCGGCGGTGTTAGCAGCTCCTTTCCTGACCCTTCTTCAGGGCTGCCATTCTTCAATCAGCTGCCCCTAAACATGCCTCAGTTGCCTACTGTTGATGCTAATTGGGCTGCCAACAACTCCAATGCTGGAAGGCAATCTTTCTGA 801 0.5968 MAGIDLGSASHFVHHHHHLQRPDLEDDDQDGSSNDALDLVSPTQGGPGGDVAARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSSGCDVFDSVATYARKRQRGICVLSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTVFLGGGQGQVVGGNVVGALVASGPVIVIASSFTNVAYERLPLEEDEALQMAPQGQSSGGGGVSSSFPDPSSGLPFFNQLPLNMPQLPTVDANWAANNSNAGRQSF* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3861 266 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 265 - -
Aev06g3861 266 Gene3D - 81 214 - -
Aev06g3861 266 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 265 IPR014476 GO:0003680
Aev06g3861 266 MobiDBLite consensus disorder prediction 211 238 - -
Aev06g3861 266 SUPERFAMILY AF0104/ALDC/Ptd012-like 78 211 - -
Aev06g3861 266 MobiDBLite consensus disorder prediction 15 72 - -
Aev06g3861 266 CDD DUF296 82 157 IPR005175 -
Aev06g3861 266 ProSiteProfiles PPC domain profile profile. 78 214 IPR005175 -
Aev06g3861 266 Pfam Plants and Prokaryotes Conserved (PCC) domain 82 195 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3861 Aev-Chr6 38410473 38411273 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3861 1 266 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 56.250 2.09e-91 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3861 - - gmx:100814613 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3861 06 38410473 38411273 Aev06g3861 06 38410473 38411273 ECH