Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3860 ATGTTACCGGAGTTGATGAACTTTTTGAGGGCCTGCTTTCGGCCAAGCTCGGACCGGCACGCACGCGGTGGCTCAGATGCTGGAGGTAAGCAGGATGGACTCTTGTGGTACAAGGACTCCGGGCAGCACCTGCATGGTGAGTTCTCAATGGCTGTGGTCCAAGCCAACAACTTGCTGGAGGATCAGAGCTATCTTGAATCAGGCTGCTTGAGCTCCACTGAATCCGGCCCTTTTGGCACCTTTGTTGGTGTCTATGATGGCCATGGGGGGCCCGAGACATCCCGATTTATCAATAACCATCTAGTTCACCATCTCAAGAAGTTTGCTGCAGAGCAACAATCAATGTCAGTCGATGTAATTCGCAAGGCAATCCAAGCAACAGAAGAGGGGTTTATGTCTCTTGTTGCCAGGCAGTGGGCAATGAATCCACAAATTGCAGCTGTTGGATCATGCTGTCTTGTTGGTGTTATATGCAATGGAACCCTATATATAGCAAATCTTGGCGATTCCCGGGCTGTAATGGGAAGAGCAGTCAAGGCAACTGGGGAGGTTTTAGCCGTACAATTATCATCAGAGCACAATGCATCGATAGAATCCGTAAGGCATGAGCTGCAATCTGCGCACCCAGATGATTCACAGATTGTTGTTCTCAAGCATAATGTATGGCGTGTGAAGGGCCTCATCCAGATTTCTAGATCTATTGGTGATGTATATCTGAAAAAGGCTGAGTTCAATAGAGAACCTCTGTATGCAAAGTTTCGGCTTCGTGAGCCATTTAAGAAGCCAATATTGAGCTCAGAACCATCAATATCTGTGCATCAGTTGCAGCCACAAGATCAGTTTATTATATTTGCATCTGATGGGCTTTGGGAGCACCTCAGCAATCAAGAAGCAGTTGATATTGTTCAAAATAATCCCCGCTCTGGAATTGCAAGGAGGCTGGTGAAAACTGCCCTACAAGAAGCAGCAAAGAAGAGAGAAATGAGATATTCGGACCTCAAGAAGATCGACCGGGGGGTTCGTCGCCATTTCCACGACGATATCACGGTGATTGTGGTGTTTATTGAGTCGAGTTTCGTGAGTAAGGCGAGCTGTGTGAGGTTCCCAAGTGTTTGTGTTAGAGGTGGGGTTCCAAAGATGGGTGTGGCTCAAAACATTTTCGATATGGAGGAGGGAACCTTGGAGATTGGAATGGAATACAGAACTGTGTCTGGAGTTGCGGGACCATTGGTCATCCTTGACAAAGTTAAGGGACCCAAATTTCAAGAGATTGTTAATATTCGATTAGGAGATGGAACTACTCGTCGTGGACAAGTACTAGAAGTTGATGGTGAGAAAGCTGTTGTTCAGGTCTTTGAAGGCACCTCTGGGATTGACAATAAATTTACGACTGTGCAATTTACTGGAGAGGTGTTAAAAACTCCGGTCTCACAGGACATGCTTGGACGCATATTTAATGGCTCTGGAAAACCAATTGATAATGGTCCGCCCATTTTACCCGAGGCTTACTTGGACATATCAGGAAGTTCCATTAATCCTAGTGAGAGAACCTATCCAGAGGAGATGATACAAACAGGGATATCTACTGTTGATGTCATGAATTCTATTGCTAGAGGTCAGAAGATCCCTCTATTCTCAGCTGCTGGTCTCCCCCATAATGAAATTGCTGCACAGATATGCCGTCAGGCTGGCTTAGTAAAGCGCTTGGAGAAGTCCGATAATCTTCTTGAGGGTGGAGAAGAGGACAATTTTGCCATTGTTTTTGCAGCTATGGGAGTTAATATGGAGACTGCACAGTTTTTCAAACGTGATTTTGAGGAGAACGGCTCAATGGAGAGAGTGACCCTTTTTCTTAATCTGGCAAATGATCCTACAATTGAACGTATCATCACTCCTCGTATTGCTCTTACTACTGCCGAATATCTGGCATATGAATGCGGCAAGCATGTTCTTGTGATACTCACAGATATGAGTTCTTATGCCGATGCTCTTCGTGAGGTATCTGCTGCACGAGAAGAAGTACCCGGAAGACGTGGGTATCCCGGTTACATGTATACAGATCTTGCAACAATATATGAACGCGCTGGAAGAATTGAGGGGCGAAAAGGCTCTATTACACAAATTCCAATTCTAACTATGCCGAACGATGATATTACCCATCCAACTCCTGATCTTACAGGATATATTACCGAGGGACAGATTTACATTGATAGACAGCTGCATAATAGGCAGATATATCCACCAATCAATGTGCTCCCATCATTGTCTCGATTGATGAAGAGTGCCATTGGGGAGGGGATGACACGAAGGGATCATGCTGATGTGTCCAACCAGCTGTATGCAAATTACGCAATTGGGAAGGATGTGCAGGCAATGAAAGCTGTGGTTGGTGAAGAAGCACTTTCATCTGAGGACCTGCTGTATCTGGAATTCTTGGACAAGTTTGAAAGGAAGTTTGTTGCCCAAGGAGCGTATGACACGCGCAACATCTTCCAGTCGCTAGATCTTGCATGGACTCTGCTTCGCATCTTCCCTCGTGAGCTTCTTCATCGTATCCCTGCTAAGACTCTCGATCAGTACTACTCCCGAGATGCCGCTATTCATTGA 2607 0.4572 MLPELMNFLRACFRPSSDRHARGGSDAGGKQDGLLWYKDSGQHLHGEFSMAVVQANNLLEDQSYLESGCLSSTESGPFGTFVGVYDGHGGPETSRFINNHLVHHLKKFAAEQQSMSVDVIRKAIQATEEGFMSLVARQWAMNPQIAAVGSCCLVGVICNGTLYIANLGDSRAVMGRAVKATGEVLAVQLSSEHNASIESVRHELQSAHPDDSQIVVLKHNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKFRLREPFKKPILSSEPSISVHQLQPQDQFIIFASDGLWEHLSNQEAVDIVQNNPRSGIARRLVKTALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFIESSFVSKASCVRFPSVCVRGGVPKMGVAQNIFDMEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKFQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSQDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTVDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYSRDAAIH* 869
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3860 868 Gene3D - 408 867 - -
Aev06g3860 868 Pfam Protein phosphatase 2C 80 324 IPR001932 -
Aev06g3860 868 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 473 762 IPR027417 -
Aev06g3860 868 ProSitePatterns ATP synthase alpha and beta subunits signature. 747 756 IPR020003 GO:0005524
Aev06g3860 868 CDD ATP-synt_V_A-type_beta_N 399 470 - -
Aev06g3860 868 CDD PP2Cc 48 355 IPR001932 -
Aev06g3860 868 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Aev06g3860 868 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Aev06g3860 868 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 526 756 IPR000194 GO:0005524
Aev06g3860 868 Hamap V-type ATP synthase beta chain [atpB]. 397 865 IPR022879 -
Aev06g3860 868 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 382 866 IPR022879 -
Aev06g3860 868 SMART PP2C_4 41 353 IPR001932 -
Aev06g3860 868 ProSiteProfiles PPM-type phosphatase domain profile. 44 355 IPR001932 -
Aev06g3860 868 TIGRFAM V-ATPase_V1_B: V-type ATPase, B subunit 399 865 IPR005723 GO:0033180|GO:0046961|GO:1902600
Aev06g3860 868 CDD ATP-synt_V_A-type_beta_C 766 860 - -
Aev06g3860 868 CDD V_A-ATPase_B 471 758 - -
Aev06g3860 868 PANTHER V-TYPE PROTON ATPASE SUBUNIT B1-RELATED 382 866 - -
Aev06g3860 868 Gene3D - 36 364 IPR036457 -
Aev06g3860 868 Pfam ATP synthase alpha/beta family, beta-barrel domain 403 469 IPR004100 GO:0046034|GO:1902600
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aev06g3860 Aev-Chr6 38396827 38404419 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3860 379 866 Primary Pumps ATPases(2) AT4G38510 96.311 0.0 969
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3860 K02147 - gmx:100793764 946.036