Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3843 ATGGTGCCCATTAGGCTTTTATCATTGTATCATCAGGTCATCATCTTCACATTCATGTGTGTGCTGATTCTTACACTCCCTTCAATCCAAGTTGCTGGATTTTCCATGATTGCAGACAGTGAAGAAGCAAATGCTCTGTTGAAGTGGAAATCTAGCCTTGACAACCATAGCCAAGTTCTCTTGTCATCTTGGAATAATAATGGCACTTCTTCTTCTACTAGTCCTTGCAACTGGGAAGGAATTTGGTGTGATAAGTCCAGCTCCGTCTCCAAAATAGTTCTTGCAAATTATGGACTTAAAGGTACACTCCACTCACTCACCTTCTCTTCCTTCCCCAACCTTGTCAGCATAGACATCAACAACAATTCATTCCAAGGAACCATTCCCCCACAAATTGGTAACTTGTCTAGACTTTATCATCTGAACATGTCCTACAATAATTTCACTGGTTCCATTCCTGAAGAAATGTTCACACTTGGGAGTTTACATAGGCTAGATCTTGCTGTATGCAATTTCAGTGGACAAATTCCTGTTTCTATTGCAAACTTGACCAACTTGTCATATCTAGATTTATCATACAACAAAATAGAAGGCAACATTCTCCCTGAAATCACCAAGTTAAGCAAACTAGAGCACCTAGCCCTTGCATTAAATCCTCTTGGTGGTTCCATTCCAAAAGAAATTGGAATGCTAACAAACCTTAGGTTCCTTGATTTGTCACTCTGCTCTCTCTCTGGAACTGTCCCTTCAGAAATTGGGAACTTGACCAATTTGAATTATCTTCAGCTTCTTGCAAATAACCTCTATGGCCCAATTCCACCCTCCATATGGAACATGACTAATTTGTCAGTGCTCTACATTTCTGAAAACAAATTTTCAGGGTCAATCCCAGACTCAATAGGAAACTTGGGCAATCTGAGTATCCTTGATATTTCCAAAACTCAAATCTCTGGACCAATTCCTCCTGTTGTTGGAAACTTGACAAAGCTCACTATTTTGTACTTGTTCAATAATAGCCTCTCTGGAACAATACCTGCATCTATTGGAAATCTGGTCAATTTGAAGACCCTCAGCCTCTCAGGAAACAATCTCTCTGGGACTATTCCTTCCACTATAGGAAACTTGGTTCGGCTCACCGATCTGCAATTGGCCTCAAACAAATTTAATGGCAGCATTCCTGAGGAAATGAACAACCTTATCAATCTGCAGAACTTGCAATTGTATGGGAATAGTTTTGTTGGCCATTTGCCACCACATATCTGCTTAGGTGGGGCATTGTTAAACTTTGGTGCTAATGGCAACAAATTTTCTGGCCCAGTACCTATAAGCTTGAAGAACTGCACTAGTATCACAAGAATTAGGCTTGATGGAAACCAACTTGAAGGAAATATAACACCAGATTTTGGTGTTTATCCTAATTTGGACTACATCAATCTCAGTGGCAACAAGTTTTATGGTCACATTTCTCCAAATTGGGGGAAATGCCTTAAACTTACAAGGCTTATAATAGGTGGCAACAATATTTCTGGTGGCATACCAAAAGAACTTGCTGAGGCAACCAACCTAGGAAGGATTGACCTTTCATCAAACCAGTTGACTGGAGAGGTTCCAAAGGAAATGAGGAATTTGAAACAATTACTTCAACTCCAGATAGGCAACAATCATTTTTCTGGAAACATTCCCACAGAAATTGGATTGCTGCAAGACCTTGACACCTTGGATCTTGGAGGAAATGAGTTAAGTGGCACCATACCAAAAGAAGTTGTGGAGCTGAAAAAGTTAAGGCAATTGGATTTGAGCAAAAATAAACTAGAGGGAAGCATTCCGTCTGAGTTAGGCCAATCCTTGGTGTCTATTGATCTTAGTGGCAATTCCTTGGATGGAACAATGCCAACAAGCCTTGGAGGGTTGCAGCACCTGCAAGTGTTGAATCTGTCACATAATAATCTTTCCGGCACCATTCCATCCACTTTTAGTAAGACACTGGACATTGTAGACATATCAGACAATCACTTGCAAGGGCCACTCCCTAACAGTCCAGCTTTTGTTGATGCTTCAATTGAAGCATTTAAGAATAACAAAGGCTTGTGTGGCAATGTTACAGACTTGGTTCCATGCAAAACCAGCCGCAGCAAAAAGAGCAAAAATGCCATCATTGTGGTTTTGATTATTTTGGGAACTCTGATTCTAGTGCTTTGTGGTGTGGCACTTGCAATGTGTATTCTTTTTCCAAGTAAAAGAAAGGAAGAAAGTCGTCAAAGCCAGGCTAAAGAAGCACGAAGTGAATCACTTTTTACCATATGGAGTTATGATGGGAAAATAATGTTTGAAAGTATCATTGAGGCCACAGAGAATTTCCATGAAGATTATCTGATTGGAGTAGGAAGCCAAGGATATGTGTACAAGGCCGAGTTGCCTGCAGGTTTGGTTGTTGCAGTGAAGAAACTTCATTTGGTATCAGATGAGGAAGTATCTGACATAAAAGCCTTCACTAATGAGATTCAATCACTGACACAAATCAAGCACAGGAACATCATAAAGCTGTATGGATTTTGTTCACATTCACAGTTCACATTTCTGGTATATGAGTTCTTGGAAGGGGGCAGCTTGGACAGAATACTAAGCAGTGACACACTAGCAGCTTCTTTTGATTGGGAGAAGAGAGTGAATGCTGTCAAGGGTGTGGCCAATTCCTTGTCCTATATGCATCATGAGTGCTCTCCTCCTATGGTTCATCGCGATATTTCAAGCAAGAATGTTCTGTTGGATGCTGAATATGAAGCTCATGTTTCTGATTTTGGGACAGCCAAGTTTCTGAAGCCTGGTTCACATAGTTGGACACCATTTGCAGGCACCTTTGGTTATGCTGCTCCAGAACTTGCTCAAACTATGGAAGTGAATGAGAAGTGTGATGTATATAGTTTTGGAGTACTGGCTTTGGAAATCATCATGGGAAAGCACCCAGGAGATCTCATTTCAGCGTTTATGTCACCATCTACAGCTCCAATGGCTAATAATCTGCTACTGATTGATATTTTAGACCAAAGACCTCCTGAACCACCTAGGAATAATCCAATTATTGTTGAAGAGGTGGTCTTGATTGCAAGGTTGGCACTGTCTTGCTTGAGGACAAGACCAGGTTTTAGACCAACAATGAATCAAGTGTCTAAGGCCCTTGTGATGATGGGAAAATCATCACCATTGGTGGATGAGTTCTCCTCCATCAGACTTGCTCAACTCCAATGA 3246 0.4085 MVPIRLLSLYHQVIIFTFMCVLILTLPSIQVAGFSMIADSEEANALLKWKSSLDNHSQVLLSSWNNNGTSSSTSPCNWEGIWCDKSSSVSKIVLANYGLKGTLHSLTFSSFPNLVSIDINNNSFQGTIPPQIGNLSRLYHLNMSYNNFTGSIPEEMFTLGSLHRLDLAVCNFSGQIPVSIANLTNLSYLDLSYNKIEGNILPEITKLSKLEHLALALNPLGGSIPKEIGMLTNLRFLDLSLCSLSGTVPSEIGNLTNLNYLQLLANNLYGPIPPSIWNMTNLSVLYISENKFSGSIPDSIGNLGNLSILDISKTQISGPIPPVVGNLTKLTILYLFNNSLSGTIPASIGNLVNLKTLSLSGNNLSGTIPSTIGNLVRLTDLQLASNKFNGSIPEEMNNLINLQNLQLYGNSFVGHLPPHICLGGALLNFGANGNKFSGPVPISLKNCTSITRIRLDGNQLEGNITPDFGVYPNLDYINLSGNKFYGHISPNWGKCLKLTRLIIGGNNISGGIPKELAEATNLGRIDLSSNQLTGEVPKEMRNLKQLLQLQIGNNHFSGNIPTEIGLLQDLDTLDLGGNELSGTIPKEVVELKKLRQLDLSKNKLEGSIPSELGQSLVSIDLSGNSLDGTMPTSLGGLQHLQVLNLSHNNLSGTIPSTFSKTLDIVDISDNHLQGPLPNSPAFVDASIEAFKNNKGLCGNVTDLVPCKTSRSKKSKNAIIVVLIILGTLILVLCGVALAMCILFPSKRKEESRQSQAKEARSESLFTIWSYDGKIMFESIIEATENFHEDYLIGVGSQGYVYKAELPAGLVVAVKKLHLVSDEEVSDIKAFTNEIQSLTQIKHRNIIKLYGFCSHSQFTFLVYEFLEGGSLDRILSSDTLAASFDWEKRVNAVKGVANSLSYMHHECSPPMVHRDISSKNVLLDAEYEAHVSDFGTAKFLKPGSHSWTPFAGTFGYAAPELAQTMEVNEKCDVYSFGVLALEIIMGKHPGDLISAFMSPSTAPMANNLLLIDILDQRPPEPPRNNPIIVEEVVLIARLALSCLRTRPGFRPTMNQVSKALVMMGKSSPLVDEFSSIRLAQLQ* 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3843 1081 SUPERFAMILY RNI-like 367 674 - -
Aev06g3843 1081 Gene3D Transferase(Phosphotransferase) domain 1 865 1071 - -
Aev06g3843 1081 SUPERFAMILY Protein kinase-like (PK-like) 766 1061 IPR011009 -
Aev06g3843 1081 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 184 260 - -
Aev06g3843 1081 Pfam Leucine rich repeat 329 388 IPR001611 GO:0005515
Aev06g3843 1081 Pfam Leucine rich repeat 615 672 IPR001611 GO:0005515
Aev06g3843 1081 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 264 1080 - -
Aev06g3843 1081 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 264 1080 - -
Aev06g3843 1081 PRINTS Leucine-rich repeat signature 594 607 - -
Aev06g3843 1081 PRINTS Leucine-rich repeat signature 637 650 - -
Aev06g3843 1081 ProSiteProfiles Protein kinase domain profile. 786 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g3843 1081 ProSitePatterns Tyrosine protein kinases specific active-site signature. 910 922 IPR008266 GO:0004672|GO:0006468
Aev06g3843 1081 Gene3D Ribonuclease Inhibitor 297 398 IPR032675 -
Aev06g3843 1081 Gene3D Phosphorylase Kinase; domain 1 745 864 - -
Aev06g3843 1081 Gene3D Ribonuclease Inhibitor 399 715 IPR032675 -
Aev06g3843 1081 SMART LRR_sd22_2 613 639 - -
Aev06g3843 1081 SMART LRR_sd22_2 327 353 - -
Aev06g3843 1081 SMART LRR_sd22_2 519 545 - -
Aev06g3843 1081 SMART LRR_sd22_2 183 212 - -
Aev06g3843 1081 SMART LRR_sd22_2 591 606 - -
Aev06g3843 1081 SMART LRR_sd22_2 567 588 - -
Aev06g3843 1081 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 184 260 - -
Aev06g3843 1081 Pfam Protein kinase domain 787 1057 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g3843 1081 ProSiteProfiles Leucine-rich repeat profile. 639 660 IPR001611 GO:0005515
Aev06g3843 1081 SUPERFAMILY L domain-like 67 417 - -
Aev06g3843 1081 ProSiteProfiles Leucine-rich repeat profile. 185 208 IPR001611 GO:0005515
Aev06g3843 1081 Pfam Leucine rich repeat N-terminal domain 40 84 IPR013210 -
Aev06g3843 1081 Gene3D Ribonuclease Inhibitor 39 199 IPR032675 -
Aev06g3843 1081 Gene3D Ribonuclease Inhibitor 200 296 IPR032675 -
Aev06g3843 1081 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 25 188 - -
Aev06g3843 1081 SMART LRR_typ_2 183 207 IPR003591 -
Aev06g3843 1081 SMART LRR_typ_2 351 375 IPR003591 -
Aev06g3843 1081 SMART LRR_typ_2 637 660 IPR003591 -
Aev06g3843 1081 SMART LRR_typ_2 591 615 IPR003591 -
Aev06g3843 1081 SMART LRR_typ_2 279 303 IPR003591 -
Aev06g3843 1081 SMART LRR_typ_2 135 159 IPR003591 -
Aev06g3843 1081 SMART LRR_typ_2 399 423 IPR003591 -
Aev06g3843 1081 SMART LRR_typ_2 231 255 IPR003591 -
Aev06g3843 1081 SMART LRR_typ_2 327 350 IPR003591 -
Aev06g3843 1081 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 25 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3843 Aev-Chr6 38309471 38312920 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3843 22 958 Receptor kinase-like Gene Family AT4G08850 43.592 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aev06g3843 Pkinase 4.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3843 - - gmx:100812486 1240.71