Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3828 ATGGATTCGGAGTTTGCATACTTGGAATATCTTCAACAATACCTGCTTGACAATAATAATGATTCAAGCATCCTCAAGTCCACAGATTTCTCTGAAGAATCACATCAAGATCAAGCTATTAATAATCCAACTCATCCTAGTACTTGTGATTCTTCATCAGATACAACTAATTCTTCTCAAGGAGCAGATCAGATCAGTCCTACTTCCAACAAAGCAGCGCGTGAGGTGCAAGCGCCTCCAATATGGAAGCGCTATAGGGGGGTGAGGCGCAGGCCATGGGGGAAGTTCGCGGCGGAGATAAGAGACCCGAAGAAGAACGGTGCAAGAGTATGGCTTGGGACATATGAAACTGAGGAGCAAGCAGCTTTAGCATATGACAAAGCTGCTTTCAAGATGCGAGGCCGAAAAGCCAAGCTCAATTTTCCTCATCTCATTGGCTCAGACGAAAAGCCTGAGCCAGCGAGGGTGGTCACTAGTGTGAAGCGGGGCTCACCAGAGCCTTCTTCACCTAATTCATCATCATCTTCTGAGGATTGTTCAAATTCTCAAGGGTCCAAGAGGAGGAGGAGGAACCTGGCTGATCTACTGAATAAGCTGGCCAAGAATAACAGAGGCCAAGCTGCTACGGTGGTTAAAATGGACCCAGATCATGCAAATGGAATTGATCAATGGTTGAATGATGATGACTTCAATGCCATTGCAGATCTAATTTATTAG 717 0.4547 MDSEFAYLEYLQQYLLDNNNDSSILKSTDFSEESHQDQAINNPTHPSTCDSSSDTTNSSQGADQISPTSNKAAREVQAPPIWKRYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETEEQAALAYDKAAFKMRGRKAKLNFPHLIGSDEKPEPARVVTSVKRGSPEPSSPNSSSSSEDCSNSQGSKRRRRNLADLLNKLAKNNRGQAATVVKMDPDHANGIDQWLNDDDFNAIADLIY* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3828 238 PRINTS Ethylene responsive element binding protein signature 124 144 IPR001471 GO:0003700|GO:0006355
Aev06g3828 238 PRINTS Ethylene responsive element binding protein signature 85 96 IPR001471 GO:0003700|GO:0006355
Aev06g3828 238 Gene3D AP2/ERF domain 83 143 IPR036955 GO:0003700|GO:0006355
Aev06g3828 238 CDD AP2 83 144 IPR001471 GO:0003700|GO:0006355
Aev06g3828 238 SMART rav1_2 84 148 IPR001471 GO:0003700|GO:0006355
Aev06g3828 238 Pfam AP2 domain 84 134 IPR001471 GO:0003700|GO:0006355
Aev06g3828 238 ProSiteProfiles AP2/ERF domain profile. 84 142 IPR001471 GO:0003700|GO:0006355
Aev06g3828 238 MobiDBLite consensus disorder prediction 144 188 - -
Aev06g3828 238 PANTHER DNA-BINDING DOMAIN 2 204 IPR044808 GO:0003700|GO:0009873
Aev06g3828 238 SUPERFAMILY DNA-binding domain 84 143 IPR016177 GO:0003677
Aev06g3828 238 MobiDBLite consensus disorder prediction 34 73 - -
Aev06g3828 238 PANTHER AP2-DOMAIN DNA-BINDING PROTEIN 2 204 - -
Aev06g3828 238 MobiDBLite consensus disorder prediction 22 78 - -
Aev06g3828 238 MobiDBLite consensus disorder prediction 162 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3828 Aev-Chr6 38171839 38172555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3828 84 168 AP2-EREBP Transcription Factor Family AT2G44840 77.647 1.14e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev06g3828 AP2 4.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3828 K09286 - gmx:102663872 179.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3828 06 38171839 38172555 Aev06g3828 06 38171839 38172555 ECH