Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3799 ATGGGAATCATGATGGAGAGTGAAGTTAGCTTGCGAAGAAGGAGCCGAGTGTCCATGGAAGAAGGTGAGATTCAAAGAGAATTGTGTATCAAGAAACGACGAAGAGAGCCTGCTGCAAAAGCAAAATGTTCTGATGATAATCTCCAGCAGCCACAGCAACAAGTTGGTGAAAATTCTACTATGAACACTACTAAGAGGAGCTCAAGATTTCGCGGTGTCAGCAGACATAGATGGACGGGTCGATTTGAAGCTCATTTGTGGGACAAGCTCTCTTGGAATGTAACACAAAAGAAGAAAGGCAAGCAAGGGGCTTATGATAAAGAGGAATCTGCAGCCAGAGCATATGATTTAGCTGCACTAAAGTACTGGGGAACATCAACTTTCACCAACTTCCCGGTATCAGATTATGAGAAAGAGCTAGAAATAATGCAGACTATGACCAAAGAAGAATACTTGGCCACTTTAAGGAGAAAAAGCAGTGGCTTCTCAAGAGGCGTCTCGAAGTATAGGGGTGTTGCAAGGCACCACCACAATGGTAGATGGGAAGCAAGGATAGGAAGGGTTTTTGGAAACAAATATCTCTACCTCGGCACCTATAGTACCCAAGAGGAAGCTGCTCGTGCTTATGACATAGCAGCAATTGAGTACAGAGGAATTAATGCTGTAACCAACTTTGATCTGAGTAATTACATAAGATGGTTAAATCCTCAAGGACAAAGTACCACAGAGGCATCCCCATCTAACTATACTCCAATACAAGAGTCAAAATCATTGGCACTTCAAAATAGTCTAAATGACTTTAATTCCCATGAAAAGCAAGAAGTCTTTGATACCAATTCCTACAGATTCTTGAGCAACAAGTCATCTTCTCCTACTGCACTTGGTCTTCTCCTTCGCTCTTCGCTATTCAGGGAATTGGTTGAGAAGAATTCAAATGTCTCAGGGGATGAAACTGATGAGGAATATGTCACAAAGGATCAACAACACATAGCCTGTGATGAAGAACTTGGTGGTATATCCTATGATGGCAATGAAGACATCCCATTTGTCTATGATCTCAATATATACAACTTAGAATCACAAGAAAGAGACATCTACTCAATTTTTTGA 1110 0.4126 MGIMMESEVSLRRRSRVSMEEGEIQRELCIKKRRREPAAKAKCSDDNLQQPQQQVGENSTMNTTKRSSRFRGVSRHRWTGRFEAHLWDKLSWNVTQKKKGKQGAYDKEESAARAYDLAALKYWGTSTFTNFPVSDYEKELEIMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSNYIRWLNPQGQSTTEASPSNYTPIQESKSLALQNSLNDFNSHEKQEVFDTNSYRFLSNKSSSPTALGLLLRSSLFRELVEKNSNVSGDETDEEYVTKDQQHIACDEELGGISYDGNEDIPFVYDLNIYNLESQERDIYSIF* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3799 369 CDD AP2 167 228 IPR001471 GO:0003700|GO:0006355
Aev06g3799 369 ProSiteProfiles AP2/ERF domain profile. 69 132 IPR001471 GO:0003700|GO:0006355
Aev06g3799 369 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 325 - -
Aev06g3799 369 ProSiteProfiles AP2/ERF domain profile. 168 226 IPR001471 GO:0003700|GO:0006355
Aev06g3799 369 Gene3D AP2/ERF domain 167 228 IPR036955 GO:0003700|GO:0006355
Aev06g3799 369 Gene3D AP2/ERF domain 68 134 IPR036955 GO:0003700|GO:0006355
Aev06g3799 369 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 7 325 - -
Aev06g3799 369 MobiDBLite consensus disorder prediction 45 68 - -
Aev06g3799 369 Pfam AP2 domain 68 124 IPR001471 GO:0003700|GO:0006355
Aev06g3799 369 Pfam AP2 domain 167 218 IPR001471 GO:0003700|GO:0006355
Aev06g3799 369 PRINTS Ethylene responsive element binding protein signature 208 228 IPR001471 GO:0003700|GO:0006355
Aev06g3799 369 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Aev06g3799 369 SMART rav1_2 69 138 IPR001471 GO:0003700|GO:0006355
Aev06g3799 369 SMART rav1_2 168 232 IPR001471 GO:0003700|GO:0006355
Aev06g3799 369 SUPERFAMILY DNA-binding domain 167 228 IPR016177 GO:0003677
Aev06g3799 369 SUPERFAMILY DNA-binding domain 68 134 IPR016177 GO:0003677
Aev06g3799 369 MobiDBLite consensus disorder prediction 34 70 - -
Aev06g3799 369 CDD AP2 68 134 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3799 Aev-Chr6 38016102 38018014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3799 65 230 AP2-EREBP Transcription Factor Family AT5G57390 69.822 5.77e-82 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Aev06g3799 AP2 3.4e-09 CL0081