Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3793 ATGATGGCACCGCCAAAGTACACCTTATTATCCTGCATTCTCTGTTTGTTATTCTTTTGCATTCATTTAACAATTACAGCATCTGCAGCAGCAGGAGGCTCATATTTGTTTGAAAAAGAGTCATCATCACCACAAGACTGGTTCAACCATGGTGGAGACTTGTTTAACAGAAGGTATGCCAACAGGGAAAAGAAGATCAGCACAAGAACAGTTCATAGTTTGAGTCTGAAGTGGAAATTCTATGCAGGTGAAGAGGTAACTGCAACACCAGCAATATTCAAAGGAACAATTTATTTCACAAGCTGGAATGGGTATGTGTTTGCAGTGAAAGCATCTGATGGGTCCCTAGTGTGGAAGCAGAACATTCAGAACATAACAGGAATTGCTTCACCTGGCTCTATAAGAAATGTCAATTCCACATTCTCAAGAGCAACTCCTACTATAGCTGCTGATCATGATTTGCTTGTTGTTGGAATATGTGGCCCTGCTGTGGTTATTGCTCTCAACAGAAGAAATGGAGAGCTTGTTTGGAAGACTCTATTGGATACCCATCATGAAGCTGTTATCACCATGTCTGGAACATATTACAAAGGGGGTTTCTATGTGGGAACATCTTCCCAAGAAGAAATGTTAAGCATAGAGGAATGTTGCACATTCCGTGGTAGCCTCTCAAAAGTGGACATAAAAAGTGGGGCCATCATATGGCAAACCTATGTGCTACCAGACAACCATGGCAACAGAGGTGAATATGCAGGTGCTGCCATTTGGGGAAGCAGCCCCTCCATTGATCCTCACAGAAATATGGTGTTCATCGCCACAGGCAATCTCTACTCTGCCCCGCTAAGTGTGCGCCAGTGCCAACAAAAGGAGAACAATCAAACGGTGCATACGCATCCTGATCCGTGTGTTGAGCCTGATAACCACTCCGATTCAATCCTGGCCCTTGATCTGGACTCAGGGAACATCACATGGTACCGTCAATTGGGAGGCTATGATGTTCTGTTTGTAGCATGTTTCGATCCTTCCAAGTCCCCAAATTGTCCTCCGGGGCCAAACCCTGATGCTGATTTTGGTGAGGCACCAATGATTCTCACAACCTATGTGAATGGTTCCAAGCATGATGTTGTTGTTGCTGTCCAGAAAAGTGGTGTTGCATGGGCTTTACATCGTGACAATGGTACTATCCTATGGTTTAAGGAAGCAGGACCAGGAGGGATAGGTGGAGGAGGAACATGGGGAGCAGCCACAGATGGAAAAAGAGTGTACACCAACATTGCCAACACAAATGCCAAGAACTTCACATTAGCACCATCAAATAACATGACAACAAGCGGTGGATGGGTTGCGATGGATGCAAGGGATGGTAAAATCCTATGGTCCATTGCAGATCCTAGCAATGTGACCCATCGCTACAATGGGCCAGTGAGTGTGGCAAATGGTATTGTGTTTGCAGCATCACCGAGTGCCAAGGGGCCAATACATGCCATAGATGCAAAGAGTGGGCAAATTATATGGTCTTATGAGACTGGCACTGTTGGTGTCACTGGAGGGGTCTCTATAAGTGATGGCTGCATTTATGTGGGCCAGGGTGTTAGTAGACTCACTGCACCTCCAGGCTATAACTTCACCGCAGCAACTTCTGTCTTTGCCTTCGGTCAATATTCACAAGACTGGTTGAACCATGGTGGAGATTTGCTCAACAGAAGATATGCATACAGAGAGTACAAGATCAGCCCCAAAACAGCACCAAAATTAAGTCTGAAATGGAAATTCAAAGCAGGAAAAGATATAACAGCAACACCAGCAATATATGATGGTACCCTTTATTTTCCAAGCTGGAATGGTAACATCTATGCAGTGAATGAAGGTGATGGATCCCTTGTCTGGAAGCAGAACTTGCATGAACTGACAGGTCTAAATGCAACTGGATTTGTGATTGGTGTGAATTGGACAGTGTCAAGGTCAACTCCAACAATAGCTGAGGATTTATTGATTGTTGGAATCTATGGTCCTGCTGCTGTTATTGGTCTAAACAGAACAAATGGTGTGCTTGTGTGGTTCAGCTATTTGGATCATCATCCTGCAGCAATCATTACCATGTCTGGAACACACTACAATGGAGGTTTCTATGTGGGAATATCTTCACTAGAAGAAGGATCAAGCATTGAGCAATGCTGTGTATTTCGCGGAAGCATGGCGAAACTCGATGCTCGATCCGGAGCCATCATATGGCAGACCTACATGCTTCCAGATAACCATGACAAGAAAGAAGGTTATGCAGGAGCAGCAATTTGGGGTAGTAGCCCCTCCATTGATGCTCAGAGAAACCATGTTTACATAGCCACAGGGAACCTTTATTCTGCTCCACAGAACATACTTGAGTGCCAAGAAAGGCAGAACAACCAAACAGTGCCTACTCAACCTGATCAATGTATTGAGCCTGAAAACCACTCCAATTCAATCCTGGCCCTTGATTTGGACACTGGGAATATCAGATGGTTCCACCAGCTTGGAGGGTATGATGTGTGGTTCTTTGCATGCAACAATGCCTCTACTTCTGGTTGTCCTCCTGCAGGTTCTAACCCTGATGCTGATTTTGGGGAGGCACCAATGATGTTGACAGCATATGTCAATGGAACCATGAAATTGAAAGATATTGTTGTTGCTGTTCAGAAAAGTGGCTTTGCTTGGGCTTTGGATCGCAACAATGGCAACCTTGTTTGGTTTAAGGAAGCAGGGCCAGGTGGTCCTGCAGGAGGAGGAACATGGGGTGCAGCCACTGATGAAAGGAGAGTTTACACCAACATTGCAAATTCACTAGGCAAAAACTTCACTCTTACACCATCAAATATAACTACAACCACTGGTGGATGGGTGGCTATGGATGCAAACAATGGAAAAATTCTATGGTCCATTGCTAATCCTAGTAACAGCACTGCTAGTGGACCTGTTAGTGTTGCAAATGATGTTGTCTTTGCTGGATCAACCAATAGATTGGGGTCCATATATGCAATAAATGCTAAAAATGGCAAGATTTTGTGGTCCTATCAAACTGGAGGAAGTGTCTATGGAGGCATGTCAATTGGCAATGGTTGCATATTTGTTGGTAGTGGATATAATGTTTCTCTTGGCTCTGCCTTGAACTTGACCAGTGGAACCTCTCTGTTTGCTTTCTGTGTAACCCAACAACAATGTGCACTGTTCTGTTCCCAGACGCGCCAACAAAACAGCAAGGAGAAAGGTGTCATAGATTTGAGCCAGTACCCTCCTGAGCTTATTAGAAACTTCTCAATCATTGCACACGTTGATCATGGAAAATCCACTCTTGCGGATCGCCTCCTTGAACTCACTGGAACCATTAAGAAAGGCCATGGCCAACCACAGTATCTTGATAAATTGCAGGTGGAGAGGGAAAGAGGAATCACGGTTAAAGCGCAGACAGCTACAATGTTCTATAAACGCATAACAAATGATGATGATAGTAGTGATGGAAAAGAGGCACCTAGATTTTTGCTGAATCTTATTGACACTCCTGGACATGTGGATTTTAGCTATGAGGTGTCAAGGTCATTGGCAGCTTGTCAAGGTGTGCTTTTGGTTGTTGATGCTGCACAAGGAGTCCAAGCTCAAACCGTTGCTAACTTTTACCTCGCTTTTGAGTCTAACCTTACAATTGTACCTGTTATAAACAAGATTGACCAGCCAACTGCTGATCCCGATCGTGTTAAAGCCCAATTGAAATCGATGTTTGATCTTGACCCAAGTGATGCATTGCTAACATCTGCTAAAACTGGACAAGGTCTTGAGCAGGTCCTTCCGGCAGTCATTGATCGCATACCTCCACCTCCTGGGAAGAATGATTCTTCTCTACGCATGCTTTTGCTAGATTCATATTATGATGAATACAAGGGGGTGATATGCCATGTTGCTGTTGTCGATGGTGTCCTGCGCAAGGGAGATAAGATTTCATCCGCCGCAACTGGTCAGTCATATGAAGCTTTGGATATTGGCATCATGCATCCTGAACTTACACCTACTGGAATCTTGCATACTGGGCAAGTCGGTTATGTTGTAAGTGGCATGCGTTCAACCAAAGAGGCACGTGTTGGAGATACAATTTACCATACTAGAAACACCGTAGAGCCTCTTCCAGGATTCAAACCAGCAAAACATATGGTATTCTCTGGTCTTTATCCAGCAGATGGATCTGATTTTGAAGCACTCAACCATGCAATCGAGAGGCTGACATGTAATGATGCCAGTGTCTCTATTACTAAAGAAACTAGCACAGCTCTAGGTCTGGGGTTCAGGTGTGGATTTTTAGGTTTACTTCACATGGATGTTTTTCACCAACGGCTTGAGCAGGAGTATGGAGCTCATGTTATCTCAACTGTTCCTACTGTGCCCTATATATTTGAATATTCTGATGGAAGCAAATTAGAAGTTCAGAATCCTGCTTCATTACCCTCTAATCCCAAGCAACGAGTGACAGCCTGTTGGGAACCTACAGTAATAGCTACTATAATCATTCCTAGTGAGTATGTGGGACCTGTTATTACCCTTTGCTCTGAGCGTAGGGGTCAACAGTTGGAGTACTCATTCATTGATAGTCAACGGGCATTCATGAAGTATCGCATGCCTTTGAGAGAGATTGTTGTTGACTTCTATAATGAATTGAAGAGCATTACATCAGGCTATGCATCATTTGATTATGAGGATGCAGATTATCAACAATCTGATCTAGTGAAACTCGATATTCTCTTGAATGGGCAACCTGTTGACGCAATGGCAACCATTGTTCATAACATGAAAGCATATCGTGTTGGGCGTGAACTGGTTGAGAAATTGAAGAAAGTCATAGACAGGCAAATGTTTGAGATAACCATACAAGCTGCAATTGGGTCAAAGGTTATTGCAAGAGAGACGATTTCTGCATTGAGGAAGAATGTTCTTGCCAAGTGTTATGGTGGTGATGTTACCCGAAAGCGGAAGCTGTTGGAGAAGCAAAAGGAAGGAAAGAAGCGAATGAAACGTATTGGTTCTGTTGATATACCACAAGAAGCATTCCATGAACTATTGAAGGTTTTGAAACCTGCTGGCCTCACAAGGTTTTATGCTGTGGAGGCAGAGAAGGCTTCATAA 5142 0.4385 MMAPPKYTLLSCILCLLFFCIHLTITASAAAGGSYLFEKESSSPQDWFNHGGDLFNRRYANREKKISTRTVHSLSLKWKFYAGEEVTATPAIFKGTIYFTSWNGYVFAVKASDGSLVWKQNIQNITGIASPGSIRNVNSTFSRATPTIAADHDLLVVGICGPAVVIALNRRNGELVWKTLLDTHHEAVITMSGTYYKGGFYVGTSSQEEMLSIEECCTFRGSLSKVDIKSGAIIWQTYVLPDNHGNRGEYAGAAIWGSSPSIDPHRNMVFIATGNLYSAPLSVRQCQQKENNQTVHTHPDPCVEPDNHSDSILALDLDSGNITWYRQLGGYDVLFVACFDPSKSPNCPPGPNPDADFGEAPMILTTYVNGSKHDVVVAVQKSGVAWALHRDNGTILWFKEAGPGGIGGGGTWGAATDGKRVYTNIANTNAKNFTLAPSNNMTTSGGWVAMDARDGKILWSIADPSNVTHRYNGPVSVANGIVFAASPSAKGPIHAIDAKSGQIIWSYETGTVGVTGGVSISDGCIYVGQGVSRLTAPPGYNFTAATSVFAFGQYSQDWLNHGGDLLNRRYAYREYKISPKTAPKLSLKWKFKAGKDITATPAIYDGTLYFPSWNGNIYAVNEGDGSLVWKQNLHELTGLNATGFVIGVNWTVSRSTPTIAEDLLIVGIYGPAAVIGLNRTNGVLVWFSYLDHHPAAIITMSGTHYNGGFYVGISSLEEGSSIEQCCVFRGSMAKLDARSGAIIWQTYMLPDNHDKKEGYAGAAIWGSSPSIDAQRNHVYIATGNLYSAPQNILECQERQNNQTVPTQPDQCIEPENHSNSILALDLDTGNIRWFHQLGGYDVWFFACNNASTSGCPPAGSNPDADFGEAPMMLTAYVNGTMKLKDIVVAVQKSGFAWALDRNNGNLVWFKEAGPGGPAGGGTWGAATDERRVYTNIANSLGKNFTLTPSNITTTTGGWVAMDANNGKILWSIANPSNSTASGPVSVANDVVFAGSTNRLGSIYAINAKNGKILWSYQTGGSVYGGMSIGNGCIFVGSGYNVSLGSALNLTSGTSLFAFCVTQQQCALFCSQTRQQNSKEKGVIDLSQYPPELIRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKRITNDDDSSDGKEAPRFLLNLIDTPGHVDFSYEVSRSLAACQGVLLVVDAAQGVQAQTVANFYLAFESNLTIVPVINKIDQPTADPDRVKAQLKSMFDLDPSDALLTSAKTGQGLEQVLPAVIDRIPPPPGKNDSSLRMLLLDSYYDEYKGVICHVAVVDGVLRKGDKISSAATGQSYEALDIGIMHPELTPTGILHTGQVGYVVSGMRSTKEARVGDTIYHTRNTVEPLPGFKPAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVSITKETSTALGLGFRCGFLGLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEYSDGSKLEVQNPASLPSNPKQRVTACWEPTVIATIIIPSEYVGPVITLCSERRGQQLEYSFIDSQRAFMKYRMPLREIVVDFYNELKSITSGYASFDYEDADYQQSDLVKLDILLNGQPVDAMATIVHNMKAYRVGRELVEKLKKVIDRQMFEITIQAAIGSKVIARETISALRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRIGSVDIPQEAFHELLKVLKPAGLTRFYAVEAEKAS* 1714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3793 1713 Pfam Elongation factor G C-terminus 1501 1586 IPR000640 -
Aev06g3793 1713 Gene3D - 1091 1284 IPR027417 -
Aev06g3793 1713 Hamap Elongation factor 4 [lepA]. 1089 1699 IPR006297 GO:0005525
Aev06g3793 1713 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 1131 1146 IPR031157 -
Aev06g3793 1713 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 555 1025 IPR011047 -
Aev06g3793 1713 Gene3D Translation factors 1285 1383 - -
Aev06g3793 1713 TIGRFAM lepA: elongation factor 4 1092 1695 IPR006297 GO:0005525
Aev06g3793 1713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1090 1304 IPR027417 -
Aev06g3793 1713 SUPERFAMILY Translation proteins 1281 1379 IPR009000 -
Aev06g3793 1713 TIGRFAM small_GTP: small GTP-binding protein domain 1096 1271 IPR005225 GO:0005525
Aev06g3793 1713 CDD EF4_II 1290 1375 - -
Aev06g3793 1713 Gene3D - 1466 1579 - -
Aev06g3793 1713 PRINTS GTP-binding elongation factor signature 1173 1183 IPR000795 GO:0003924|GO:0005525
Aev06g3793 1713 PRINTS GTP-binding elongation factor signature 1138 1146 IPR000795 GO:0003924|GO:0005525
Aev06g3793 1713 PRINTS GTP-binding elongation factor signature 1095 1108 IPR000795 GO:0003924|GO:0005525
Aev06g3793 1713 PRINTS GTP-binding elongation factor signature 1225 1234 IPR000795 GO:0003924|GO:0005525
Aev06g3793 1713 Gene3D - 542 1061 - -
Aev06g3793 1713 Gene3D - 33 520 - -
Aev06g3793 1713 Pfam GTP-binding protein LepA C-terminus 1588 1694 IPR013842 -
Aev06g3793 1713 PANTHER QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) 16 552 - -
Aev06g3793 1713 PANTHER QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) 554 1061 - -
Aev06g3793 1713 PANTHER PQQ ENZYME REPEAT PROTEIN 554 1061 - -
Aev06g3793 1713 SUPERFAMILY EF-G C-terminal domain-like 1500 1594 IPR035647 -
Aev06g3793 1713 Pfam PQQ-like domain 87 324 IPR002372 -
Aev06g3793 1713 Pfam PQQ-like domain 898 1021 IPR002372 -
Aev06g3793 1713 Pfam PQQ-like domain 589 833 IPR002372 -
Aev06g3793 1713 Pfam PQQ-like domain 386 533 IPR002372 -
Aev06g3793 1713 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 42 517 IPR011047 -
Aev06g3793 1713 SUPERFAMILY EF-G C-terminal domain-like 1392 1469 IPR035647 -
Aev06g3793 1713 CDD lepA_C 1501 1580 IPR035654 -
Aev06g3793 1713 CDD LepA 1094 1282 - -
Aev06g3793 1713 CDD EF4_III 1391 1466 - -
Aev06g3793 1713 Gene3D Elongation Factor G (Translational Gtpase), domain 3 1384 1465 - -
Aev06g3793 1713 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1091 1283 IPR000795 GO:0003924|GO:0005525
Aev06g3793 1713 SMART ire1_9 945 973 IPR018391 -
Aev06g3793 1713 SMART ire1_9 427 462 IPR018391 -
Aev06g3793 1713 SMART ire1_9 601 632 IPR018391 -
Aev06g3793 1713 SMART ire1_9 769 836 IPR018391 -
Aev06g3793 1713 SMART ire1_9 983 1017 IPR018391 -
Aev06g3793 1713 SMART ire1_9 702 747 IPR018391 -
Aev06g3793 1713 SMART ire1_9 146 180 IPR018391 -
Aev06g3793 1713 SMART ire1_9 90 121 IPR018391 -
Aev06g3793 1713 SMART ire1_9 261 327 IPR018391 -
Aev06g3793 1713 SMART ire1_9 192 238 IPR018391 -
Aev06g3793 1713 SMART ire1_9 474 508 IPR018391 -
Aev06g3793 1713 Pfam Elongation factor Tu GTP binding domain 1093 1280 IPR000795 GO:0003924|GO:0005525
Aev06g3793 1713 Gene3D - 1580 1654 IPR038363 -
Aev06g3793 1713 PANTHER PQQ ENZYME REPEAT PROTEIN 16 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3793 Aev-Chr6 37960551 37971832 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3793 1093 1234 Eukaryotic Initiation Factors Gene Family AT1G56070 41.667 5.55e-23 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3793 K21594 - gmx:100781092 1152.5