Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3786 ATGGCGCCAGAAATATGGAGGAGAGTAGTAGTAGTGTTTCATCTTGTTATTGTGATTATTATTTCTTCTGCCCAGCTTGAATTGGAAGCCGATGCTATACTCCGCAGTGGGTGGTGGAACACGTCCTGTTATTATTACCACAACATCTCCGGTCGTTGTGATTGGCATGGTATAACTTGCAACCACGCCGGAAGCATCACTGCGATCAACTATATCGACCATTCCCGTCATAATTATTATTATGATGAGTATTGGAACGTTGAATTGGCAATACTCAACCTCTCCGCTTTCAACAATTTGGAGATACTCGATCTCAGTTACTCACATGTACAGGGGAATATCCCACCACAAATCGGTAATCTCGCCAAACTCACTCATCTCAATTTATCAGGCAATTTTCTTTCTGGTGAGATACCTTCTTCCTTGGGAAACCTTACCCATTTAAGGTACCTTGACTTGTCTAACAACCACATTGGAGGTTCCATTCCCCAAGAGCTAGAGTTCCTGAAAAATCTAGTCACTTTGGGTCTATCTCACAACAGTATCAATGGGCCAATTCCTTCTGAATTAGGTCGATTGACCAACTTGCAAGCGCTGAGGCTAAGTTACAATTCCATAAGTGGGCAACTACCTTTCTCAATTCAAAGACTTGCACATCTAACCACCATCGAACTTAATAACAACCTGTTTAGTGGTCAAATACCACCACTACTTGGAAGTTTGCCAAACTTAACAATATTGGATCTCAGCTACAATAGTTTCACAGGAAAAATTCCCTGCTCTTTTGCAGTTTTTTACACTGATCCAGGCAGATACTTAGACATTTCATACTATAATCTGGAAGATCCCACTCCAGATATTTCACTCCTAACAACTTGTTCAACTCGATTGAAGGAAGAAGATAGCAAATTAATCCACCATCTATACATAGTTCTTGCACTCTTCTTTTTACTAATCCTGACCTCCTCATTGCTCATGTATCTAAAGGCAACCAAGAGCAAACAAGCAAATCAAGCAGCAACTAAGAACGGGGATCTGTTCTCCATATGGAACTTTGATGGAAAGATAGCTTTTGAAGACATCATCAAAGCTACTGAAGATTTTGACCTCAGGTACTGCATTGGAACAGAGGAGCCTGCTTATGAAAACAGTTTCAGAAATGAAGTGAAAGTGCTTACAGAGATAAAGCACCTAAACATTGTGAAACTTCATGGATTCTGCTTGCACAGAAGGAGCATGTTCTTGATCTATGAGTACATGGAGAAAGGAAGCTTGTTCTCTGTGCTATATGATGATGCAGAAGCTGTGGAATTGGACTGGAAAAAGAGGGTTAACATCATTAAAGGCATAGCACATGCTCTGTCCTATCTGCATCATGATTGCAACCCTCCAATTGTGCATAGAGACATAACCACAAGCAATGTTCTGCTCAACTCAGAGTGGCATCCAACTGTTGCAGACTTTGGCATTGCCCGGCTCCTCAGTTTTGATTCGTCCAACAGAACTATAGTTGCTGGAACTTATGGATATATTGCCCCAGAGCTTGCCTATACTATGGTTGTGAGTGAAAAGTGTGATGTGTATAGCTTTGGAGTTGTTGTGCTTGAAACTTTGGTGGGAAAGCATCCTCAGGAAATTCTGTCATCACTCCAATCAAAATCAGCATCTTCTCTGAACATTGCTCTATGTGATGTATTGGACCAACGCCTTGCACCGCCAAATCAAGCAGTTTTACAAGACATAGTTCGAGTTGCAATTGTGGCATTTGCATGCTTGAATCCTAATCCATGTTATCGGCCATCAATGAACTGTGTCTCCCAGAGTTTTCTGTCTCAGCAAACTCCATTGATCATTCCTCTGCGTGAAGTTTCATTGCAACAACTCAAAAGTCAAGAGCTTCTTACACTAGTCAACTTCTCCAAATGA 1926 0.4128 MAPEIWRRVVVVFHLVIVIIISSAQLELEADAILRSGWWNTSCYYYHNISGRCDWHGITCNHAGSITAINYIDHSRHNYYYDEYWNVELAILNLSAFNNLEILDLSYSHVQGNIPPQIGNLAKLTHLNLSGNFLSGEIPSSLGNLTHLRYLDLSNNHIGGSIPQELEFLKNLVTLGLSHNSINGPIPSELGRLTNLQALRLSYNSISGQLPFSIQRLAHLTTIELNNNLFSGQIPPLLGSLPNLTILDLSYNSFTGKIPCSFAVFYTDPGRYLDISYYNLEDPTPDISLLTTCSTRLKEEDSKLIHHLYIVLALFFLLILTSSLLMYLKATKSKQANQAATKNGDLFSIWNFDGKIAFEDIIKATEDFDLRYCIGTEEPAYENSFRNEVKVLTEIKHLNIVKLHGFCLHRRSMFLIYEYMEKGSLFSVLYDDAEAVELDWKKRVNIIKGIAHALSYLHHDCNPPIVHRDITTSNVLLNSEWHPTVADFGIARLLSFDSSNRTIVAGTYGYIAPELAYTMVVSEKCDVYSFGVVVLETLVGKHPQEILSSLQSKSASSLNIALCDVLDQRLAPPNQAVLQDIVRVAIVAFACLNPNPCYRPSMNCVSQSFLSQQTPLIIPLREVSLQQLKSQELLTLVNFSK* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3786 641 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 127 376 - -
Aev06g3786 641 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 376 635 - -
Aev06g3786 641 ProSiteProfiles Leucine-rich repeat profile. 147 170 IPR001611 GO:0005515
Aev06g3786 641 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 376 635 - -
Aev06g3786 641 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 127 376 - -
Aev06g3786 641 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 23 263 - -
Aev06g3786 641 ProSitePatterns Tyrosine protein kinases specific active-site signature. 465 477 IPR008266 GO:0004672|GO:0006468
Aev06g3786 641 SUPERFAMILY L domain-like 52 288 - -
Aev06g3786 641 SMART LRR_typ_2 121 144 IPR003591 -
Aev06g3786 641 SMART LRR_typ_2 241 264 IPR003591 -
Aev06g3786 641 SMART LRR_typ_2 169 193 IPR003591 -
Aev06g3786 641 SMART LRR_typ_2 145 168 IPR003591 -
Aev06g3786 641 ProSiteProfiles Protein kinase domain profile. 347 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g3786 641 Pfam Leucine Rich Repeat 243 264 IPR001611 GO:0005515
Aev06g3786 641 Gene3D Phosphorylase Kinase; domain 1 362 423 - -
Aev06g3786 641 PRINTS Leucine-rich repeat signature 148 161 - -
Aev06g3786 641 PRINTS Leucine-rich repeat signature 241 254 - -
Aev06g3786 641 Gene3D Ribonuclease Inhibitor 186 307 IPR032675 -
Aev06g3786 641 Gene3D Ribonuclease Inhibitor 29 185 IPR032675 -
Aev06g3786 641 SUPERFAMILY Protein kinase-like (PK-like) 363 607 IPR011009 -
Aev06g3786 641 Gene3D Transferase(Phosphotransferase) domain 1 424 616 - -
Aev06g3786 641 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 23 263 - -
Aev06g3786 641 Pfam Protein kinase domain 381 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g3786 641 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3786 Aev-Chr6 37926096 37928299 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3786 64 513 Receptor kinase-like Gene Family AT4G08850 37.275 1.10e-99 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aev06g3786 Pkinase 1.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3786 - - var:108327179 577.785