Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3782 ATGGAGGGCGGAGGGAGAAGTTCGAAGGGAGAATGGCGAAGCGCCGATGAGGTTGACCGTGACCTTCAACCTCGTAAAGGGTCGAGGCAGCGCTCTCCTCCACGAGAAAATGGTGGAGTCCGCCTCCGACAAGTTCTTAGTGGTGGTGGACGACACCAAGCTGCTGGTGACAAGGCTCAGGGGAAAAGGTCAAGGCAACAATCAGGATCTAGTAGGATCTCGGATGACCAAATCATCGACCTTGTTTCAAAGTTGCGTCAATTTCTTCCTGAGATTCGCAATAGGCGTTCTGATAAGGTTTCAGCATCTAAGGTACTACAAGAAACTTGCAACTACATTAGAAGCTTACACAGAGAGGTTGATGACTTAAGCGAGCGATTAGCTCAGTTGTTAGCCACAATTGATGCTGATAGTCCTGAGGCTGCTATCATTAGGAGCCTACTTAACCACTAA 453 0.4879 MEGGGRSSKGEWRSADEVDRDLQPRKGSRQRSPPRENGGVRLRQVLSGGGRHQAAGDKAQGKRSRQQSGSSRISDDQIIDLVSKLRQFLPEIRNRRSDKVSASKVLQETCNYIRSLHREVDDLSERLAQLLATIDADSPEAAIIRSLLNH* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3782 150 MobiDBLite consensus disorder prediction 60 76 - -
Aev06g3782 150 PANTHER TRANSCRIPTION REGULATOR 61 148 - -
Aev06g3782 150 Gene3D - 57 140 IPR036638 GO:0046983
Aev06g3782 150 PANTHER TRANSCRIPTION FACTOR PRE 61 148 IPR044293 GO:0006355|GO:0040008|GO:0046983
Aev06g3782 150 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 62 116 IPR011598 GO:0046983
Aev06g3782 150 MobiDBLite consensus disorder prediction 1 32 - -
Aev06g3782 150 MobiDBLite consensus disorder prediction 1 76 - -
Aev06g3782 150 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 80 135 IPR036638 GO:0046983
Aev06g3782 150 Coils Coil 113 133 - -
Aev06g3782 150 CDD bHLH_AtPRE_like 67 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3782 Aev-Chr6 37891376 37901349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3782 72 148 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G39860 79.487 1.40e-37 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev06g3782 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3782 - - gmx:100794486 142.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1432 05 10568467 10570059 Aev06g3782 06 37891376 37901349 PCT