Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3779 ATGACCCTGCTCTGTTTTTTCACCTTCCCCTGTTTCTCTCTCTCTCTCTCTGTTTTCGCTTCAAAAGGGAATGAACTTGTTCGTGGACTCGTTCCGCGTGTGCCTCAACGAGATTTTTGTGAGATACCCAATTCTTATTCGGTGATCATGAGTTATCAGAAGGGTTTTTTGCACCGAAAGGTGGTTCTTTTTTCTGGGTATTTTTGGGTCCTGTTTTCTAAGCTTATGCAAACTCTGTTCTGGGTTTTCAACAAAATCTTAATGAGATACTACAGTTCTAAGGCAATGAACTCTGCTTGTTCTCCTAATTCTTCCCCTGAAACTCATCAAACTAAGCCAAACAGTGAGACCGGGGCAGATGTTCCTGAATCATTTGAAGAAGACACTGAGTTGAATTCTGAGAATTTAGGGTCATTTTCTGATACTTTACAACATGAAAGTAATCAAATTGATTCTGAAAGTTCCCCGCTAGAGGAAGAAGCATGGTCCATGGAAAAATGTTCTACAACTGTTGTTGAAGATAGTGTTAATTTTGGTCTTGAAGACGAAGAGGAGGAAGAACCATCAAAATTGGTTTTCAAATTTCAATACCAAAGTTGGAATTGCAACCTGAGTGAAGAATCCAAGGAGAGTAATGATGAAAGTTGTGATTTTGTGAAGAGGGACACTGTTTCAGCTAACACTAACAAGTATCAGTTCTTCTCTGGCATGAGTTTCAGCCACTTCTTGGATGAACCACAAGCTTCAAATTTCACTGTGAAGGAATTGTTTATTCATTCAAATGATGATCTTGCAATTGAAAATCAAGTTACTAATGATTCTGAAGCAGGTGCTAATGGAGAAATTCTTAACAATTCCACAGAAAAGGTGCACAAAAAGGAGGTTTCACAGAATTTCAATGGTGTTTCATCTTCAGAACAACCTGTGGAACCGCTTGCAGATAATTTACCTTCTGAAGATGATTTCATTTGCTCAAGCATTGACTCGGATTCTATAGGTTCTATGGAAGATGGGTTCTTGTCAGACACAGACTTTGGAACCACTATTGATCTTGACAAATTGGGAAACCATGACCAAGAAAATGCAGGCCTAACAGATGAAGATTTGGACTTCATGGAAGAAAAAGATTTGGAGAATTTGGAACTTGGGTATGAGCCTGATGATTTTGCTGAAGAAGATGAAGATATAATGGTTGAGCTCAGAAAATTAGAAGATTCTATGGTGAGGGATTCATCAAATATGGAAGGAGAAAAAGAAAAGTCTTCAGGAAGTAGCATCAATTCAAAATATGAAGAGTCTGTGAAAAAGAATTCAGATAGTGTAGAAGCTATAGATGCTGATGATTCCAATCGGTTTGACACACTTTGGGAACATCAAGATTTGATAGAACAGCTGAAGATGGAGCTGAAGAAGGTTAAAGCAACTGGTCTACCTACCATCCTTGAAGATTCCGAGTCTCCAAGGATAATGGAAGATTTGAAACCATGGAACATTGATGAGAAATTCCAGCATGGTAGTACCACCAATGAGCTTCCAAAATTCTACAGGAGTTACAGAGAGAGGATGAGGAAATTTGATATCTTAAATTACCAAAAGATGTATGCCATAGGTTTCCTAGAGTCAAAGGACCCACTGAAATCATTTTCATGGCACAAGAAATTGTATCAACCATCCCATTCGCTCAGAAGAATGATAATTCCACCACGGGTCTCTAGGCGAAAGAACAATGAGGGTGACCCAATGAACAAGTTCATGAGAGAATTGTACAGTGACTTGGAAATGGTGTACGTGGGACAACTGTGTCTTTCTTGGGAGTTCCTTCAGTGGGAATATGACAAGGCTCTCGAGTTGTGGGAATCTGACCAATACTCTTTCAGAAGGTTCAATGAGGTTGCTGGGGAATTCCAACAGTTTCAAGTGCTTCTCCAAAGGTTCATTGAGAATGAACCTTTTCAAGGCCCAAGGGTTGAAAACTACACCAACAATCGTTGTGTTATGCGCAATCTTCTTCAAGTTCCACTCATAAGAGATGACAACTCCAAGGATAAAAAGAAATTAAGACAAAGAGAGCCCGAGGACGAAGATGCCATCACTAGTGACATGTTAGTAGAGATTTTGGAGGAATCCATCAGAACAATTTGGCGTTTCATCAAAGCTGATAAGGATGCATCAAGCTTGACACTTAAAGGCGCAAGAGACACAGCTACTCAACTTGAGCTCCAAGACCCCGCAGACTCACAACTTCTTGTAGAAATTCTAACCGATCTTCAAAAGAAGGAAAAGAGATTGAGGGAGGTATTAAGGAGTGGAAGCTGCATATTGAAGAAATTGAAAAAGCAAAAAAATGAAGAAGGGATGGATCAAGTGCTATACTTCTTCTCTCAAGTGGATATGAAATTGGTTTGGAGAGTGTTGAACATGTCACGGATTACGACCGATCAACTAGCTTGGTGTCGCAAGGCAACACCAACACCAACAACAATGGTGCAGAGGCTCACTTATCGCAAGCGTCACAGCTATGCCACCAAATCTAACCAGCACCGCGTCGTCAAAACCCCCGGTGGTAAGTTGGTGTACCAGAGCACCAAGAAAAGAGCAAGCGGACCTAAGTGCCCTGTAACTGGCAAGAGGATTCAAGGGATTCCACACTTGAGACCTGCTGAATACAAGAGATCCAGATTGCCTAGAAACCGCCGGACAGTAAACCGGGCCTATGGAGGTGTATTATCTGGTGGAGCTGTTAGAGAAAGGATAATCCGTGCCTTCCTTGTTGAAGAACAAAAGATTGTGAAAAAGGTATTGAAGATCCAGAAGGCAAAAGACAAGCAAGCAGCAAAGAGTTAA 2844 0.4079 MTLLCFFTFPCFSLSLSVFASKGNELVRGLVPRVPQRDFCEIPNSYSVIMSYQKGFLHRKVVLFSGYFWVLFSKLMQTLFWVFNKILMRYYSSKAMNSACSPNSSPETHQTKPNSETGADVPESFEEDTELNSENLGSFSDTLQHESNQIDSESSPLEEEAWSMEKCSTTVVEDSVNFGLEDEEEEEPSKLVFKFQYQSWNCNLSEESKESNDESCDFVKRDTVSANTNKYQFFSGMSFSHFLDEPQASNFTVKELFIHSNDDLAIENQVTNDSEAGANGEILNNSTEKVHKKEVSQNFNGVSSSEQPVEPLADNLPSEDDFICSSIDSDSIGSMEDGFLSDTDFGTTIDLDKLGNHDQENAGLTDEDLDFMEEKDLENLELGYEPDDFAEEDEDIMVELRKLEDSMVRDSSNMEGEKEKSSGSSINSKYEESVKKNSDSVEAIDADDSNRFDTLWEHQDLIEQLKMELKKVKATGLPTILEDSESPRIMEDLKPWNIDEKFQHGSTTNELPKFYRSYRERMRKFDILNYQKMYAIGFLESKDPLKSFSWHKKLYQPSHSLRRMIIPPRVSRRKNNEGDPMNKFMRELYSDLEMVYVGQLCLSWEFLQWEYDKALELWESDQYSFRRFNEVAGEFQQFQVLLQRFIENEPFQGPRVENYTNNRCVMRNLLQVPLIRDDNSKDKKKLRQREPEDEDAITSDMLVEILEESIRTIWRFIKADKDASSLTLKGARDTATQLELQDPADSQLLVEILTDLQKKEKRLREVLRSGSCILKKLKKQKNEEGMDQVLYFFSQVDMKLVWRVLNMSRITTDQLAWCRKATPTPTTMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKDKQAAKS* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3779 947 PANTHER OS09G0413600 PROTEIN 55 820 - -
Aev06g3779 947 Coils Coil 455 475 - -
Aev06g3779 947 MobiDBLite consensus disorder prediction 407 436 - -
Aev06g3779 947 PRINTS Ribosomal protein L34 signature 893 915 IPR008195 GO:0003735|GO:0005840|GO:0006412
Aev06g3779 947 PRINTS Ribosomal protein L34 signature 853 870 IPR008195 GO:0003735|GO:0005840|GO:0006412
Aev06g3779 947 PRINTS Ribosomal protein L34 signature 840 853 IPR008195 GO:0003735|GO:0005840|GO:0006412
Aev06g3779 947 PRINTS Ribosomal protein L34 signature 871 881 IPR008195 GO:0003735|GO:0005840|GO:0006412
Aev06g3779 947 MobiDBLite consensus disorder prediction 101 118 - -
Aev06g3779 947 MobiDBLite consensus disorder prediction 407 425 - -
Aev06g3779 947 MobiDBLite consensus disorder prediction 101 131 - -
Aev06g3779 947 Gene3D - 866 947 - -
Aev06g3779 947 Pfam Protein of unknown function (DUF1666) 590 820 IPR012870 -
Aev06g3779 947 ProSitePatterns Ribosomal protein L34e signature. 842 855 IPR018065 -
Aev06g3779 947 Pfam Ribosomal protein L34e 828 923 IPR008195 GO:0003735|GO:0005840|GO:0006412
Aev06g3779 947 Gene3D - 828 864 - -
Aev06g3779 947 PANTHER OS09G0413600 PROTEIN 55 820 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3779 Aev-Chr6 37867654 37874525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3779 828 946 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 89.916 1.04e-67 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3779 - - adu:107486723 963.37