Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3778 ATGGGAAGACCACCATGTTGTGATAAAGAAGGCGTGAAGAAAGGGCCTTGGACTCCTGAAGAGGATATCATATTGGTCTCTTATATTCAGGAACATGGTCCTGGCAATTGGAGGGCTGTTCCTACCAACACAGGGTTGTCAAGGTGCAGCAAGAGTTGCAGACTTAGATGGACAAATTACTTGAGGCCAGGCATCAAAAGGGGCAACTTCACAGAACAAGAGGAGAAGATGATCATCCATCTTCAAGATCTTTTAGGAAACAGATGGGCTGCTATAGCATCATACCTACCACAGAGAACAGATAATGACATAAAGAACTATTGGAACACTCATTTGAAGAAGAAGCTCAAGAAGTTGCAATCTGAAGGAGGAAACAACAACAACATCTTGGGAGATAATAATAATGGATTCTCAGCATCACCACAAGGACCAATTCCTAGAGGGCAGTGGGAGAGAAGGCTCCAAACCGATATCCAAATGGCAAAAAGAGCTCTGAGTGAAGCACTTTCTCCAGAGAAGCCATTCTGTTTTGATGCATCAAAAAACAACAATACTTCACTTTCCTCTTTCACTACAAAACCAACACAATCTTTGTGCTATGCTTCAAGTGCTGATAACATAGCTCGCTTGCTGAAGGGGTGGATGAAAAACAACAACAATAATAACAATAATCCACCAAAGTCATCAAGAACTAACTCATCTCTGACTCAGAATTCTTCCTTCAACAACAATTTGGGTATTGGGACTGATACAGCTACTTCTAGCAGCGGTGGTGGTGATTTGTCTGAGACTTTTGAGTCCTTGTTTGGTTTGGAGTCATTGGATTCCTCAAATTCTGATCAGTTTTCTCAGTCTTTGTCCCCTGATGCCACAGTTTTTCAAGATGAAAGCAAGCCTGATATTGGTTCTGAGATGCAATTCTCTCTGCTTGAGAAGTGGCTTCTAGAAGAGGCTGCTGGTAATTCTCAAGACAAAGTTATCACTTATTAG 990 0.4172 MGRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLSRCSKSCRLRWTNYLRPGIKRGNFTEQEEKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLKKLQSEGGNNNNILGDNNNGFSASPQGPIPRGQWERRLQTDIQMAKRALSEALSPEKPFCFDASKNNNTSLSSFTTKPTQSLCYASSADNIARLLKGWMKNNNNNNNNPPKSSRTNSSLTQNSSFNNNLGIGTDTATSSSGGGDLSETFESLFGLESLDSSNSDQFSQSLSPDATVFQDESKPDIGSEMQFSLLEKWLLEEAAGNSQDKVITY* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3778 329 MobiDBLite consensus disorder prediction 123 148 - -
Aev06g3778 329 MobiDBLite consensus disorder prediction 215 259 - -
Aev06g3778 329 CDD SANT 16 61 IPR001005 -
Aev06g3778 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Aev06g3778 329 Gene3D - 68 133 - -
Aev06g3778 329 Gene3D - 13 66 - -
Aev06g3778 329 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aev06g3778 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Aev06g3778 329 SMART sant 66 114 IPR001005 -
Aev06g3778 329 SMART sant 13 63 IPR001005 -
Aev06g3778 329 MobiDBLite consensus disorder prediction 123 142 - -
Aev06g3778 329 CDD SANT 69 111 IPR001005 -
Aev06g3778 329 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev06g3778 329 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Aev06g3778 329 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev06g3778 329 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 321 - -
Aev06g3778 329 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 321 - -
Aev06g3778 329 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3778 Aev-Chr6 37854059 37855302 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3778 1 317 MYB Transcription Factor Family AT5G62470 51.955 2.23e-105 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev06g3778 Myb_DNA-binding 1.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3778 K09422 - gmx:780543 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3730 05 35987981 35989136 Aev06g3778 06 37854059 37855302 PCT