Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3777 ATGGAGAAGTACTATCTGACCAGCAACAATGGAGAGGCATCATCCACAAGAACTTATATGACATATGGAGTGTGCGAAAAGAACCAGGCAGAACGTATTGGAGGACATGCCCTTGATGGATGCCAATCATTCTCCCCAAGTGGACAAAATGGAACACCTGCTGCTCTCATTTGTGCTGCCTGTAATTGCCAAAGGACCTTCCATAAGTTTCAAGTTCACACCGAACGTGTTGATGCATCTGCCAATCCTAATAACAATAACAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGATGATGATGATCCTTCCCTTCCTCCTACCCCAACAACAACAAGGACCTAA 372 0.3763 MEKYYLTSNNGEASSTRTYMTYGVCEKNQAERIGGHALDGCQSFSPSGQNGTPAALICAACNCQRTFHKFQVHTERVDASANPNNNNNNNNNNNNNNNNNNNNNNNNDDDDPSLPPTPTTTRT* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3777 123 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 15 99 - -
Aev06g3777 123 Pfam ZF-HD protein dimerisation region 20 69 IPR006456 -
Aev06g3777 123 MobiDBLite consensus disorder prediction 74 123 - -
Aev06g3777 123 MobiDBLite consensus disorder prediction 77 123 - -
Aev06g3777 123 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 22 69 IPR006456 -
Aev06g3777 123 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 22 71 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3777 Aev-Chr6 37845441 37845812 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3777 20 87 Zinc finger-homeobox gene family AT3G28917 48.571 7.07e-18 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aev06g3777 ZF-HD_dimer 1.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3777 - - ahf:112740679 107.457