Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3775 ATGAGGAGGTACGATCTGAGGAGCACCGGAGGAGGAGGAAGCAACGGAGCAAATAATAACAATGGTAATCCAAGTTCAAGAGCGGTGCCGCCGAACCACACAATAATAAGATCATACGTAAAACACATGGAGTGTGAGAGGAACGTGGCGGAGCGGATAGGAAGACGTGCCTACGACGGATGCAGAGAGTTTCTGGCAACGGGACCAGAGGGAACACCTGCGGCACTCATATGCGCCGCCTGTCATTGCGACATCAGATTCCATAGGCCCGTTATTCACACCGAGGTCGTCAACGTTGGACCTCCTCATAATAATACTCCTCCTCCGGCGGCGCCACGAGGAGGCGCTACCGCCTGA 357 0.5434 MRRYDLRSTGGGGSNGANNNNGNPSSRAVPPNHTIIRSYVKHMECERNVAERIGRRAYDGCREFLATGPEGTPAALICAACHCDIRFHRPVIHTEVVNVGPPHNNTPPPAAPRGGATA* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3775 118 PANTHER MINI ZINC FINGER PROTEIN 2 36 93 - -
Aev06g3775 118 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 36 93 - -
Aev06g3775 118 MobiDBLite consensus disorder prediction 1 32 - -
Aev06g3775 118 MobiDBLite consensus disorder prediction 11 32 - -
Aev06g3775 118 MobiDBLite consensus disorder prediction 98 118 - -
Aev06g3775 118 Pfam ZF-HD protein dimerisation region 40 90 IPR006456 -
Aev06g3775 118 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 42 91 IPR006456 -
Aev06g3775 118 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 42 89 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3775 Aev-Chr6 37831459 37831815 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3775 38 97 ZF-HD Transcription Factor Family AT1G74660 56.667 3.46e-16 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aev06g3775 ZF-HD_dimer 8.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3775 - - ahf:112740680 90.5077