Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3774 ATGGAAAACATAACCCAAACAACAATCACCACCACAACCACTACAACACCACCCAAATCATCATCATCACCAGAAGAGCATGAAACCGAGACACCTAGGACCCAAACAACCACAAAGGCCCTCACTTTTTCCAACGGTGTTTTGAAACGTCACCACCCACACAACCACCACCACCACCACCCTGTTTCCGCCTCCAACCACCTCCAATTGGCCGCCGTTGTGACTTACAAGGAATGCCTCAAGAACCACGCCGCTGCTTTAGGCGGCCACGCGCTCGACGGCTGCGGTGAGTTCATGCCTGCTCCCACCGCCACATCCGCCGACCCCGCATCCATCAAGTGCGCTGCCTGCGGCTGCCACCGCAACTTCCACCGCCGTGAGCCGGCGGAGGACCCGCTAATCTCCGCCGCGATAGAGTTCCAGTCGCATAACCGCCACCAACCTCCGCCCCCTCCTCCGCTCAATCGGAGCCCTAATTCAGCGTCTCCGCCGCCGATCTCCTCCTCTTACTACCCTCACCACCACCACCACCACCATCATCGGTCAGCACCTCACATGCTGCTCGCTCTCTCCGGCGCCGGAATCGCCGCCCCACCTGAAAGCACCGCTGCCCCCGTGTTCAACAGCGCTTCGCCGAGGAAGCGGTTCAGGACGAAGTTCAGCCAGGATCAGAAGGAGAAGATGCTGAAATTCGCTGAGAAAGTTGGGTGGAAGATTCAGAAAAGGGATGAAGATTTAATTCAGGAGTTTTGCAGCGATGTTGGGGTTGATCGTGGGGTTCTCAAGGTTTGGATGCACAACAACAAGAACACTTTTGCTAAGAGAGAGAATAACAGTAATAACAATCATGGTAGTGCCAATGGTGGTGGTAGCAGGGGCATAGTGGAGGGAGATTCTAACATCAACAACAATGGGAGCAACAACAACAACAATAGCGATGATGGTGGAGCTAATGTTGCTGCTAATGGTTCTTCTTCTTCTTCTTGA 987 0.5431 MENITQTTITTTTTTTPPKSSSSPEEHETETPRTQTTTKALTFSNGVLKRHHPHNHHHHHPVSASNHLQLAAVVTYKECLKNHAAALGGHALDGCGEFMPAPTATSADPASIKCAACGCHRNFHRREPAEDPLISAAIEFQSHNRHQPPPPPPLNRSPNSASPPPISSSYYPHHHHHHHHRSAPHMLLALSGAGIAAPPESTAAPVFNSASPRKRFRTKFSQDQKEKMLKFAEKVGWKIQKRDEDLIQEFCSDVGVDRGVLKVWMHNNKNTFAKRENNSNNNHGSANGGGSRGIVEGDSNINNNGSNNNNNSDDGGANVAANGSSSSS* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3774 328 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 76 127 IPR006456 -
Aev06g3774 328 SUPERFAMILY Homeodomain-like 204 274 IPR009057 -
Aev06g3774 328 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 75 127 IPR006456 -
Aev06g3774 328 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 213 270 IPR006455 -
Aev06g3774 328 Pfam ZF-HD protein dimerisation region 74 128 IPR006456 -
Aev06g3774 328 MobiDBLite consensus disorder prediction 145 160 - -
Aev06g3774 328 MobiDBLite consensus disorder prediction 296 328 - -
Aev06g3774 328 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 4 294 - -
Aev06g3774 328 MobiDBLite consensus disorder prediction 143 184 - -
Aev06g3774 328 MobiDBLite consensus disorder prediction 272 328 - -
Aev06g3774 328 MobiDBLite consensus disorder prediction 272 288 - -
Aev06g3774 328 MobiDBLite consensus disorder prediction 1 22 - -
Aev06g3774 328 MobiDBLite consensus disorder prediction 1 39 - -
Aev06g3774 328 PANTHER HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN 4 294 - -
Aev06g3774 328 Gene3D - 202 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3774 Aev-Chr6 37820148 37821134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3774 8 269 ZF-HD Transcription Factor Family AT5G15210 51.111 8.63e-72 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aev06g3774 ZF-HD_dimer 5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3774 - - gmx:100789447 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g1465 05 10953133 10954131 Aev06g3774 06 37820148 37821134 PCT