Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3771 ATGGAATTGGGAGGTGGAGGTGTCTCAATTTATCCAGAGAAGAAGCTTCTGACATACCCTTTTGGCCGCCCTGCCGAACCTGAAGCCTGCTCCAATACTAATGAGCAACACATTGTTGTCCCCATTGATGAACTTGCAAGCAGCAGGGAGAAGGTGGTGCCTACTATAACCATTAATCAAGAAGGGGTTGTTGTTAAGAAAGAGTGCCGCATTTGTCAGGACGAGGACCTTGTTTCCAAGCTTGAAATCCCCTGTGCATGCATCGGCTCCTTGATGTATGCTCATAGGAGTTGCATTCAGCGATGGTGCGACACCAGAGGCAGCATAAGGTGTGAGATCTGCAAGCAGTTTTATTCTCCAGATTATACTGCGAAGGACCCTTTTGAAGATGAGATAGTAGAGATAATACGGCAACGAGGATGCTTAATTAGAGGGACCAACATTAGAATCTACACACCACTGGAGCTGTTTGGGATGGCCATAGACCGTATTTCCAGATCAATGAATCAAAACTTCGACTTGAGAAAACCCACTCCTGGTGCTCTTCTTGGATTTACACTCCTCATTTTTATGGCTGTGATGGTTATATGTGATGCATATAACTATGCGCCACCAAGGGAGGACAAGTTCAACCACACTCTCTACTGTATTATCACGATCATCGCTGTGCCTGTCTATATTCTGCAGTGGATTTTCATGTGCATGGCTCATAGGGACAGGGAGCGCGCGGAGAGGGAGAGGCAGAGTGAGCACTCTGCATAG 762 0.4672 MELGGGGVSIYPEKKLLTYPFGRPAEPEACSNTNEQHIVVPIDELASSREKVVPTITINQEGVVVKKECRICQDEDLVSKLEIPCACIGSLMYAHRSCIQRWCDTRGSIRCEICKQFYSPDYTAKDPFEDEIVEIIRQRGCLIRGTNIRIYTPLELFGMAIDRISRSMNQNFDLRKPTPGALLGFTLLIFMAVMVICDAYNYAPPREDKFNHTLYCIITIIAVPVYILQWIFMCMAHRDRERAERERQSEHSA* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3771 253 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 127 IPR013083 -
Aev06g3771 253 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 53 240 - -
Aev06g3771 253 ProSiteProfiles Zinc finger RING-CH-type profile. 61 121 IPR011016 GO:0008270
Aev06g3771 253 SMART ringv_2 68 115 IPR011016 GO:0008270
Aev06g3771 253 Pfam RING-variant domain 69 114 IPR011016 GO:0008270
Aev06g3771 253 CDD RING_CH-C4HC3_MARCH 69 115 - -
Aev06g3771 253 SUPERFAMILY RING/U-box 67 119 - -
Aev06g3771 253 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 53 240 IPR033275 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3771 Aev-Chr6 37805072 37806813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3771 69 206 C3H Transcription Factor Family AT1G11020 24.375 6.09e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3771 - - cam:101504331 179.874