Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3770 ATGATGGAGGGGAGCACAACAACACGACAAAAGATGTTCAGCCTCAACACTGATATTGCAAGTGATGATGAGCTCCAAAAGCAATCATCATCCATTCCTAATTTTTCTTCTCATCATCATAAATCTCTTGCAAAATTTGCACAAAACTATCCTCCAAGCTTTCCCAGAAAGGTGTTGGCAGAGATAATAGGGACGTATGTGTTGGTGTTTGTGGGGAGTGGGTCAGCAGGAATGAGTGCAATCGATGAAACCAAGGTTTCCAAATTGGGAGCATCACTCGCAGCGGGCTTCATTGTGACTGTCATGATATATTCCATAGGACACATCTCCGGTGCTCATATGAATCCAGCTGTCTCCCTTGCTTTTGCCTCCATCAACCATTTTCCTTGGAAACAGGTGCCATTTTACATAGCAGCACAACTGACAGGGGCAATATCTGCTTCATACACACTGAAAGTGCTATTTGAACCAGCAACCCAGATTGGGGCAACAACACCTTCTGGATCAAACATTCAAGCACTAGTCATGGAAATTGTTGCCACATTCACCATGGTCTTCATATCCACTGCTGTGGCCACTGACCCAAAAGCTATTGGAGAGCTATCAGGAGTAGCAGTAGGCTCATCAGTTAGCATAGCAAGCATTGTAGCCGGACCAATATCAGGGGGATCAATGAACCCAGCAAGGACATTAGGTCCTGCAATTGCAAGTGCATCATACAAGGGAATTTGGGTCTATCTTGTTGGGCCAGTTACTGGGGCCTTTTTAGGGGCATGGTCTTACACTGTGGTTCAGGAAACTGATAAACCAGCTTCTACAATCTCACTATCATCCATGCAACGCCAAAGGATTAGTGAATCTGAGCAAGTTTCTCACCTCAGCTCTGTGTGA 891 0.4512 MMEGSTTTRQKMFSLNTDIASDDELQKQSSSIPNFSSHHHKSLAKFAQNYPPSFPRKVLAEIIGTYVLVFVGSGSAGMSAIDETKVSKLGASLAAGFIVTVMIYSIGHISGAHMNPAVSLAFASINHFPWKQVPFYIAAQLTGAISASYTLKVLFEPATQIGATTPSGSNIQALVMEIVATFTMVFISTAVATDPKAIGELSGVAVGSSVSIASIVAGPISGGSMNPARTLGPAIASASYKGIWVYLVGPVTGAFLGAWSYTVVQETDKPASTISLSSMQRQRISESEQVSHLSSV* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3770 296 Pfam Major intrinsic protein 53 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev06g3770 296 Gene3D Glycerol uptake facilitator protein. 14 273 IPR023271 -
Aev06g3770 296 PANTHER AQUAPORIN NIP2-1 40 285 IPR034294 -
Aev06g3770 296 ProSitePatterns MIP family signature. 113 121 IPR022357 -
Aev06g3770 296 PANTHER MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED 40 285 - -
Aev06g3770 296 CDD MIP 56 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev06g3770 296 SUPERFAMILY Aquaporin-like 50 270 IPR023271 -
Aev06g3770 296 PRINTS Major intrinsic protein family signature 132 151 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev06g3770 296 PRINTS Major intrinsic protein family signature 176 194 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev06g3770 296 PRINTS Major intrinsic protein family signature 95 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev06g3770 296 PRINTS Major intrinsic protein family signature 56 75 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev06g3770 296 PRINTS Major intrinsic protein family signature 207 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Aev06g3770 296 PRINTS Major intrinsic protein family signature 244 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3770 Aev-Chr6 37799100 37801701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3770 56 291 Major Intrinsic Protein MIP AT5G37820 47.899 1.01e-73 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3770 K09874 - gmx:100795261 354.369