Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3746 ATGGAACCCATGGAGAATGTTGCTTGCATAGCAAGAAAGCAAGCTCAGATGCTCAAATTGCCATCCGGCTTTCGGTTTCATCCCACAGATGAAGAGCTCTTAAACCACTACCTTATGAACAAGGTCATAGACAGCAGATTCTGCGCCGTAGCGATCGCCGAGGTTGATCTCAACAAGTGCGAGCCATGGGATTTGCCAGGATTGGCCAAAATGGGTGAAACAGAGTGGTACTTTTTCTGTATGAGAGACAAAAAATACACAACTGGTCAGAGAACAAACAGAGCCACTGATGCTGGGTACTGGAAGGCCACAGGGAATGACAGGGAGATTTTCATCAGCAAGAAGACCAAAATTGGAATGAAGAAGACTCTGGTTTTCTACAAAGGAAGACCCCCAAAAGGTCAAAAAACCAATTGGGTGATGCATGAATTCAGATTGGAAGGAAACCAGCTTCACTATAATCTCTCCCATCAACAAAGGAGTGAATGGGTTGTGTGCAGAGTGTTTGAGAAGACCAATTCTAGAAAAAAGGTGCATTTACCAAAGTTGGGAGAAGAACCATTACCAAAAAATGGTTCTCCATTGCAACCATTTATGGATTCTTTTGATCCATACATGAGTGAGTCATCTCAAGTTGCATGCTTCTCCAATCAGAACAGCACACATGATGGCATTGTAGTAGATAGCATGGAAGCAACTCTCATCTCTGACTCTTCCCCTGTTTCATTGGGTTTTGTCAATGAAACTCCCATGATCAACAATGTCAAATCTGTTGAGATTGCACTCCAAATTGGGAATTCATCAGACTGTCCAGCAAATAATTCTGTGCCTCAAGAATCTTCCATGCAGAAGACAGTGGTGGGATCCAATGGATCAAGTGCAGTGCAGAACCAAAAAACAGAGCCTTCTTCTGAGCAATGCAGAGTTTTTGATGATATTGATTTCTCAACTCTGATGAACAACAATGATTTGTTCTATGAGTCTGATGATGGTGGGAACCAAGAGTATTCATCAGCTTCTGCAGGGGATGTGGACATTGGCAACTTATGGAATTTTTAA 1059 0.4249 MEPMENVACIARKQAQMLKLPSGFRFHPTDEELLNHYLMNKVIDSRFCAVAIAEVDLNKCEPWDLPGLAKMGETEWYFFCMRDKKYTTGQRTNRATDAGYWKATGNDREIFISKKTKIGMKKTLVFYKGRPPKGQKTNWVMHEFRLEGNQLHYNLSHQQRSEWVVCRVFEKTNSRKKVHLPKLGEEPLPKNGSPLQPFMDSFDPYMSESSQVACFSNQNSTHDGIVVDSMEATLISDSSPVSLGFVNETPMINNVKSVEIALQIGNSSDCPANNSVPQESSMQKTVVGSNGSSAVQNQKTEPSSEQCRVFDDIDFSTLMNNNDLFYESDDGGNQEYSSASAGDVDIGNLWNF* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3746 352 ProSiteProfiles NAC domain profile. 20 171 IPR003441 GO:0003677|GO:0006355
Aev06g3746 352 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 345 - -
Aev06g3746 352 Pfam No apical meristem (NAM) protein 21 146 IPR003441 GO:0003677|GO:0006355
Aev06g3746 352 PANTHER ANAC079/ANAC080/ATNAC4 PROTEIN 16 345 - -
Aev06g3746 352 SUPERFAMILY NAC domain 14 171 IPR036093 GO:0003677|GO:0006355
Aev06g3746 352 Gene3D NAC domain 29 176 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3746 Aev-Chr6 37679985 37681248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3746 18 352 NAC Transcription Factor Family AT5G07680 46.018 3.76e-87 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev06g3746 NAM 6.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3746 - - gmx:100782172 340.502