Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3710 ATGGATTACACAACATGGCCTGAATTTCAGCAAAACCAAACCCTAATCCAAAATTCAGCACTTCCCTCTTACCCACCTCCATCATCATCCGCAGTGTTATCATCATACCCTCCACCTCAATCATCTTACACTGCCCAATACATTCCTTACCCTCAAAACCCTAACCATAACCCCACTTCAGCTTCTTCTCATGTTGCCGCTGTTGTGGAGCCTGGGTTGAACCCTCCAGGGGTTGAATCCTATGTTCCCCCATTGCCAACGGCAACACAAGTTGTGGGTCATGAACAACCCCATTTTGTTCCCAATTACTCGTACAGTGAGATTCAAACACAAGTGGTTGATCCAAGCACGTTGGTGGATTCTTCTGGGTACTACTTTGACCCCAATGCTCAAAATTGGGCTGCTAGGGAAGCTGTTAGGTTGTATGGTGCTGACCCTGTTACCTATGGAGCAGATGTAAACTCTATGCCATCAAATGGACAATTGGCTGTCCCAAATCCTAACCCTACATGGTGGACCAATACCGTGATGCAACCTCAAGCAACACAGCCTCCTGGTAATGGAACATGGAAGAAATACCCGAAGAAAGCCAAAACTAAGATTGTACAATCTGCATATTGTGAAGTTTGCAAGATAGATTGCACCAGCAAGGAGGTACTAGATCAGCATAAGTCAGGAAAGAAGCACAAGAAAAATGTGGAGAAACTAAGAGAACTATTAAGACCGCCACAAGTCCATCAACCGGTCCTAGTATCATCTAATCCGGTTATAGGACCACAGTTACCGAACAACAACAGCAAATCTACCAGCGGGAGTAGGAGTAATAAGAGGAGAACAGCTGAAACTCCTGAGGAATTGGAGAAAAAGAAGAAGAAGGTTTTGGAAGGAGGGGCGGCAGCTGAAGCAGTGAGAATATGTGCTGTATGCAATGTGATATGTAACAGTGAGACAGTCTTTAACTATCATCTTGCAGGGCAAAAGCATGCTGCTTTGATGAAGAAAGCATCTGCAAAACATGCAGAACGTATTGCCGGTTGA 1038 0.4489 MDYTTWPEFQQNQTLIQNSALPSYPPPSSSAVLSSYPPPQSSYTAQYIPYPQNPNHNPTSASSHVAAVVEPGLNPPGVESYVPPLPTATQVVGHEQPHFVPNYSYSEIQTQVVDPSTLVDSSGYYFDPNAQNWAAREAVRLYGADPVTYGADVNSMPSNGQLAVPNPNPTWWTNTVMQPQATQPPGNGTWKKYPKKAKTKIVQSAYCEVCKIDCTSKEVLDQHKSGKKHKKNVEKLRELLRPPQVHQPVLVSSNPVIGPQLPNNNSKSTSGSRSNKRRTAETPEELEKKKKKVLEGGAAAEAVRICAVCNVICNSETVFNYHLAGQKHAALMKKASAKHAERIAG* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3710 345 MobiDBLite consensus disorder prediction 238 288 - -
Aev06g3710 345 MobiDBLite consensus disorder prediction 43 62 - -
Aev06g3710 345 PANTHER ZINC FINGER RNA-BINDING PROTEIN 49 337 - -
Aev06g3710 345 MobiDBLite consensus disorder prediction 247 276 - -
Aev06g3710 345 Pfam Zinc-finger of C2H2 type 306 328 - -
Aev06g3710 345 Pfam Zinc-finger of C2H2 type 206 229 - -
Aev06g3710 345 PANTHER - 49 337 - -
Aev06g3710 345 SUPERFAMILY beta-beta-alpha zinc fingers 193 237 IPR036236 -
Aev06g3710 345 MobiDBLite consensus disorder prediction 18 37 - -
Aev06g3710 345 SMART ZnF_U1_5 202 236 IPR003604 GO:0003676|GO:0008270
Aev06g3710 345 SMART ZnF_U1_5 301 335 IPR003604 GO:0003676|GO:0008270
Aev06g3710 345 SUPERFAMILY beta-beta-alpha zinc fingers 303 339 IPR036236 -
Aev06g3710 345 Gene3D Classic Zinc Finger 276 341 - -
Aev06g3710 345 Gene3D Classic Zinc Finger 189 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3710 Aev-Chr6 37462433 37464260 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3710 201 337 C2H2 Transcription Factor Family AT5G61190 31.387 1.31e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3710 - - adu:107486664 357.066