Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3705 ATGTCTAAGTCTGATCACTCATTGGTTCCTTTGGCCCTTTTCATCTGTCTGATCCTCCAAGCCATGTCATTTTCTTATGCCATTGACCCTAATTGGTATGATGCTCATGCAACATTTTATGGTGACATGCAAGGAGGAGAAACCATGCAGGGTGCATGTGGGTATGGTGATGTGTTCAAGCAAGGGTATGGACTTGAAACCGCAGCACTAAGCACTGCTCTGTTCAACAATGGACTAACATGTGGCGCATGTTTTGAGATCAAGTGTGTCAATGATCCACAATGGTGCATAAAGGGTGCACCCTCAATCAAAGTCACTGCCACCAATTTTTGCCCTCCAAATTATTCTAAACCTAGTGGCAATTGGTGCAACCCTCCACAACGACACTTTGACTTATCCATGAAGATGTTCACCCAAATTGCCATATACAAAGCCGGGATCGTTCCGGTCAGCTATCGGCGCGTCGCGTGCACCAAAACCGGAGGTGTCAAGTTTGAGCTCAAAGGGAACCCTAATTGGTTGCTGGTGTTGGTGTACAATGTTGGCAATGTTGGTGATGTTGTTAGAGTTGGAATCAAAGGGTCAAAGAGTGGATGGTCTCCTATGTTAAGGAATTGGGGGCAGAATTGGGCTGCTAGGGTTAACTTTGTTGGACAAAGCTTGTCTTTCCAAGTCACTACTAGTGATGGCAAAACGTTGGAGTTTGGTGATGTTGCCCCTACAAATTGGCAATTCGGGCAGAACTTTGAGGCAAAGAATAACTTTTAG 768 0.4531 MSKSDHSLVPLALFICLILQAMSFSYAIDPNWYDAHATFYGDMQGGETMQGACGYGDVFKQGYGLETAALSTALFNNGLTCGACFEIKCVNDPQWCIKGAPSIKVTATNFCPPNYSKPSGNWCNPPQRHFDLSMKMFTQIAIYKAGIVPVSYRRVACTKTGGVKFELKGNPNWLLVLVYNVGNVGDVVRVGIKGSKSGWSPMLRNWGQNWAARVNFVGQSLSFQVTTSDGKTLEFGDVAPTNWQFGQNFEAKNNF* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3705 255 Gene3D - 161 255 IPR036749 -
Aev06g3705 255 PRINTS Expansin/Lol pI family signature 199 213 IPR007118 GO:0005576
Aev06g3705 255 PRINTS Expansin/Lol pI family signature 145 161 IPR007118 GO:0005576
Aev06g3705 255 PRINTS Expansin/Lol pI family signature 71 89 IPR007118 GO:0005576
Aev06g3705 255 PRINTS Expansin/Lol pI family signature 31 46 IPR007118 GO:0005576
Aev06g3705 255 PRINTS Expansin/Lol pI family signature 49 67 IPR007118 GO:0005576
Aev06g3705 255 PRINTS Expansin/Lol pI family signature 237 251 IPR007118 GO:0005576
Aev06g3705 255 SUPERFAMILY PHL pollen allergen 159 250 IPR036749 -
Aev06g3705 255 SUPERFAMILY Barwin-like endoglucanases 31 180 IPR036908 -
Aev06g3705 255 Pfam Lytic transglycolase 67 152 IPR009009 -
Aev06g3705 255 Pfam Expansin C-terminal domain 163 240 IPR007117 -
Aev06g3705 255 Gene3D - 18 158 IPR036908 -
Aev06g3705 255 PRINTS Expansin signature 137 150 IPR002963 GO:0009664
Aev06g3705 255 PRINTS Expansin signature 62 76 IPR002963 GO:0009664
Aev06g3705 255 PRINTS Expansin signature 120 137 IPR002963 GO:0009664
Aev06g3705 255 PRINTS Expansin signature 89 100 IPR002963 GO:0009664
Aev06g3705 255 PRINTS Expansin signature 103 113 IPR002963 GO:0009664
Aev06g3705 255 PRINTS Expansin signature 208 229 IPR002963 GO:0009664
Aev06g3705 255 PRINTS Expansin signature 161 173 IPR002963 GO:0009664
Aev06g3705 255 PRINTS Expansin signature 237 253 IPR002963 GO:0009664
Aev06g3705 255 PRINTS Expansin signature 173 194 IPR002963 GO:0009664
Aev06g3705 255 PANTHER EXPANSIN 13 253 - -
Aev06g3705 255 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 50 162 IPR007112 -
Aev06g3705 255 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 172 251 IPR007117 -
Aev06g3705 255 PANTHER EXPANSIN-A15 13 253 IPR002963 GO:0009664
Aev06g3705 255 SMART dpbb_1 67 152 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3705 Aev-Chr6 37442580 37443801 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3705 27 255 Expansin Gene Family AT5G39280 66.812 2.19e-118 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3705 - - zju:107415875 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3705 06 37442580 37443801 Aev06g3705 06 37442580 37443801 ECH