Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3689 ATGGCGTTCTTCAATAAACTTGGAAACCTGCTGAGGCATTCTGCTGTCAAGAACATCAATCATGATTTGTCTGGGTCGACTCCTTCGATTTTCCAGGCAATCAGATCCATGTCATCTTCAAAGCTTTTTATCGGAGGTATTTCATATAACACAGATGAGATGAGTCTGCGAGAGGCCTTTGCACGCTATGGAGAAGTTGTTGATGCAAGGATTGTTATGGATCGTGAGACTGGCAGGTCCAGAGGTTTTGGCTTCATAACCTATGCATCAACTGAGGATGCATCTTCTGCCATTCAGGCCCTGGATGGCCAGGATCTTCATGGTCGTAGGATACGGGTGAATTATGCTACAGAAAGAGCCCGCCCAGGGTTTGGAGGCGGCTACGGAGGCGGAGGCTTTGGTGGTGGCGGCTATGGTGGTGGTGGCTACGGTGGTGGCGGCGGCTACGGTGGTGGTGGCTATGGAGGTAATGATAATAGGGGTGGGGGTTATGGTGGTGGCAATGCTGAGGCTAGCAGTGAATTCGGCAGCAGTTCTGGTTCAGGATATGATAGTCAGTTTGGTGGCAACCTAGATGGCAGTATGGGTGAATCCGCATAA 600 0.5033 MAFFNKLGNLLRHSAVKNINHDLSGSTPSIFQAIRSMSSSKLFIGGISYNTDEMSLREAFARYGEVVDARIVMDRETGRSRGFGFITYASTEDASSAIQALDGQDLHGRRIRVNYATERARPGFGGGYGGGGFGGGGYGGGGYGGGGGYGGGGYGGNDNRGGGYGGGNAEASSEFGSSSGSGYDSQFGGNLDGSMGESA* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3689 199 PRINTS Eggshell protein signature 123 138 - -
Aev06g3689 199 PRINTS Eggshell protein signature 149 159 - -
Aev06g3689 199 PRINTS Eggshell protein signature 188 199 - -
Aev06g3689 199 PRINTS Eggshell protein signature 36 52 - -
Aev06g3689 199 MobiDBLite consensus disorder prediction 152 199 - -
Aev06g3689 199 Gene3D - 16 138 IPR012677 -
Aev06g3689 199 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 118 IPR000504 GO:0003723
Aev06g3689 199 MobiDBLite consensus disorder prediction 171 193 - -
Aev06g3689 199 SUPERFAMILY RNA-binding domain, RBD 28 150 IPR035979 GO:0003676
Aev06g3689 199 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 112 IPR000504 GO:0003723
Aev06g3689 199 SMART rrm1_1 41 114 IPR000504 GO:0003723
Aev06g3689 199 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3 MITOCHONDRIAL 1 184 - -
Aev06g3689 199 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 1 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3689 Aev-Chr6 37357445 37358881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3689 32 150 Eukaryotic Initiation Factors Gene Family AT4G34110 25.000 2.38e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3689 K12741 - gmx:100807155 206.453