LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev06g3687	ATGGAGCAAGGAAAGATGTTGGTTCATCATACGGTGGTAGTGGTGATTTTGTTGGTGGTGATGTTAATGGTTGGAACAACAAGAGGAGAAGAAGAAGACAGGATCTTGGAACTGCCGGGACAACCAAAGGTGTCATTTCAACAGTTCTCTGGATATGTTACTGTCAACAAGGTTGCCGGTAGAGCACTCTTCTACTGGCTCACTGAATCTCAACTCAACCCTCTCAACAAACCCCTTGTCATTTGGCTCAATGGAGGTCCGGGTTGTTCATCCGTAGCATATGGAGCATCTGAGGAAATTGGCCCTTTCAGAATAAACAAGACAGCTTCAGGCCTATACCTTAACAAGTTTTCATGGAACACGGTGGCCAACCTCTTATTCCTCGAAGCTCCGGCCGGCGTCGGCTTCTCCTACACCAATCGCTCCTCCGACCTAGTCAACACCGGCGACCGCCGCACCGCTCAAGACTCTCTGGAATTTGTAGTGCAATGGCTAGAACGATTCCCACGTTATAAAAATAGGGAACTTTACATAACTGGAGAGAGTTATGCAGGGCACTATGTCCCTCAACTAGCTAAAGAAATCATGACTTATAACACAAAGTCCAAACACCCTATCAATCTCAAAGGAATAATGGTTGGGAATGCAGTGACGGACAACTATTATGACAACTTAGGAACAGTGACATATTGGTGGAGCCATGCGATGATCTCTGACCAGACCTACAGGCAGCTCATCAGCACCTGCGACTTCCACCGCCAGAAGGAATCCGATGAGTGCGAGTCTCTCTACAGCTACGCCATGGATCAGGAATTCGGCAACATTGATCAGTACAACATCTATGCTCCTCCTTGCAACAATTCCGACGGCACCACCACCACTCGCCAAACCATGCGCTTACCTCATCGCCCCCGCCATCAGAAGGCATTTAGGCAATTGGCTGGGTATGATCCATGTACAGAAAAGTATGCGGAGATTTACTACAATAGGGCTGATGTTCAGAAAGCACTCCATGCCAACACTACTCGCATTCCTTATAAGTGGACTGCTTGCAGTGAGGTTTTGAATAGGAATTGGAATGACACGGATGTATCCATTCTTCCAATTTATAGAGAGTTGATGGCTCATGGAGTTAGAGTTTGGGTGTTCAGTGGGGATGTAGACTCAGTGGTGCCGGTAACAGCAACAAGATATGCGCTTGCTCAGCTGAAGTTAGACACTAAAATAGCATGGTATCCTTGGTATGTCAAAAAGCAGGTTGGAGGGTGGACAGAGGTATATGAAGGGCTAACATTTGCAACAGTGAGAGGAGCAGGGCATGAAGTCCCACTATTCAAGCCAAGAGCAGCTCTTCAGTTATTCAAATACTTTCTTTCAGGAAAGCCTCTTCCTAAGTCCTGA	1401	0.4682	MEQGKMLVHHTVVVVILLVVMLMVGTTRGEEEDRILELPGQPKVSFQQFSGYVTVNKVAGRALFYWLTESQLNPLNKPLVIWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKFSWNTVANLLFLEAPAGVGFSYTNRSSDLVNTGDRRTAQDSLEFVVQWLERFPRYKNRELYITGESYAGHYVPQLAKEIMTYNTKSKHPINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDQTYRQLISTCDFHRQKESDECESLYSYAMDQEFGNIDQYNIYAPPCNNSDGTTTTRQTMRLPHRPRHQKAFRQLAGYDPCTEKYAEIYYNRADVQKALHANTTRIPYKWTACSEVLNRNWNDTDVSILPIYRELMAHGVRVWVFSGDVDSVVPVTATRYALAQLKLDTKIAWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKYFLSGKPLPKS*	467

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev06g3687	466	Pfam	Serine carboxypeptidase	40	460	IPR001563	GO:0004185\|GO:0006508
	Aev06g3687	466	ProSitePatterns	Serine carboxypeptidases, serine active site.	178	185	IPR018202	GO:0004185
	Aev06g3687	466	Gene3D	alpha/beta hydrolase	29	287	IPR029058	-
	Aev06g3687	466	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	13	465	IPR001563	GO:0004185\|GO:0006508
	Aev06g3687	466	ProSitePatterns	Serine carboxypeptidases, histidine active site.	430	447	IPR033124	GO:0004185
	Aev06g3687	466	Gene3D	-	319	356	-	-
	Aev06g3687	466	PRINTS	Carboxypeptidase C serine protease (S10) family signature	115	127	IPR001563	GO:0004185\|GO:0006508
	Aev06g3687	466	PRINTS	Carboxypeptidase C serine protease (S10) family signature	128	138	IPR001563	GO:0004185\|GO:0006508
	Aev06g3687	466	PRINTS	Carboxypeptidase C serine protease (S10) family signature	430	443	IPR001563	GO:0004185\|GO:0006508
	Aev06g3687	466	PRINTS	Carboxypeptidase C serine protease (S10) family signature	164	189	IPR001563	GO:0004185\|GO:0006508
	Aev06g3687	466	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 25	13	465	-	-
	Aev06g3687	466	Gene3D	-	366	460	-	-
	Aev06g3687	466	SUPERFAMILY	alpha/beta-Hydrolases	31	464	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev06g3687	Aev-Chr6	37339816	37345821	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev06g3687	324	463	Calmodulin-binding Proteins	AT2G22960	31.206	1.07e-15	73.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev06g3687	K16297		-	gmx:100807680	835.869