Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3681 ATGGCTTCATCAAAGAGTGGCAGAAAAGCAAATGAGATCTTCAAAGGCCAAGCTCTCTTGTACACACACACTTATGCCTTTGTAGATTCCATGTGTCTCAAATGGATCATTGAGTTGGGAATACCAAACATAATCCACAACCATGGCAGACCCATTACCCTCTCCGAACTGGTCTCAGTCCTAAAAGTCCCACAAGCTAAATTCACTACTGTGGACCGTTTCATGCGATACATGGCACATATCGGATTCTTTGAGGTTGTAAGAATCCACGATGATGAAGCATTTGCTCTCACTGCTGCTTCAGAGCTCTTGGTCAAAGGCACTGATGGTCCTTGTTTGACTCCAATGGTTGAGTGTGTTCTTGATCCAGCTCTGTCGGGTTCGTTCCATGAATTGGGCAAGTGGATTTATGAGGAAAATCGTCCTCTATTTGAAGTTGCTTTAGGTATGCCTTTGTGGAACTTCCTTGACAAGAACCCTAAACATATGAGTTTGTTCAATGATGCAATGGCAAGTGATTCCGGGATGATAAAATTGGCTCTGAAAGATCACAAAGTGGTTTTTGAGGGACTTGAATCGATTGTGGATGTTGGTGGTGGAACTGGAACCATGGCCAAGATTATTTGCGAGACATTTCCTGAGTTGAAATGTACGGTGCTTGATCTTCCACAGGTTGTAGAGAGATCTTCAGGAACTAACAATTTGAGCTTTGTTGGTGGAGACATGTTTGAATCTATTCCTAAGGCTGATGCAGTTCTACTCAAGTGGATTTTGCATGATTGGAGTGATGAAAATTGCAAGAAGATTTTGGAAAATTGCAAAGAAGCTGTTTCAAGCAAGGGTAGAAGAGGAAAAATAATTATATTAGATATTGTGATAAATGAGAAAGAGGATGAACCTGAAATTACTAGAATAAAACTGCTTCTGGATGTACACATGCAATGTCTTCATGGAAAAGAGAGAACCAAAGATGAATGGAAGAAACTCTTCTCTGCTGTAGGGTTTCAAGACTACAAGATAACTCCCTTTACTGGACATTTGTCTCTTATTGAGCCTCCGCCGTCGCCCTCAATTGATCAGATTCTTGCTTCCCGCAGTGGAAGGAAGCGCGTGAAGCAGATGAAGCATAAGCGAATGGCAATGGAAACAGCTAGTGATCCAACTGCCCCCAGTGCCCAGTTGATTGGCCATGCATTTGTTCAGCAGTATTACCACATTCTTCACTATTCACCAGAGTTGGTCCACCGGTTTTACCAGGATTCCAGTTTAGTAAGCCGACCTGATTCCAAGGGTGAAATGACAACCGTTACAACCATGCAAGGAATCAATGAGGTTATTCTCTCCCTAAATTTCAAGGAGATTCAGGCGGAGATAAAGACCGCAGAAGCTCAAAAGTCATATAAGGAAGGAGTGACTGTGCTGGTCACTGGATGCTTAACTGCCAAAGATAACAAGACAAGAAGCTTTGCACAGTCCTTTTTTCTTGCGCCTCAAGAGAAAGGGTACTTTGTTCTGAATGATGTTTTTACGTACATAGAAGATCATCATGAACCATCAGAACTGCATCCAGTTAATGGAGATGGTGATGAAGTTGTTGTGTCTGTGACCCCTGAACCAGAAGAACCCATTAATGCTTCTGATCCAACTGTTGCACTGGACCCAGAAAACTCTCGTATCAAGGAGGGTCCAATTGTTGCTGAGAGCGTGGATGAGCTATCTAATCATCTTGAGGAACAGAAACCTGATGAAATTGAAGAAGACCCTGTTGAGCCCCTGGTTCAGTCAAATGGGAATGCTGATTCTCAGGCCACAAAACTGGATTCTTCTTCAGCTCAGGAAGATGTTCCAAAGAAATCTTATGCATCAGTTGTGAAAGTTCAAAAGGCTTCAGGACCTGCTATGAAGGCTAGGCCTAACAAAACAGAAAGGCAACCAGTTGAGAAGGTAGAATCTGCAGTTGTGCCTAAAGCAACACCAGAAAAAGTTAGCAATTCTGAAGGTGAGGGTGAGCATACCATTTACATTCGGAACTTCCCCATAAGTATGACTGCTGCTGACATAGAAGAAGGGTTTAAAAAATTTGGACCCATCAAGCCTGGAGGCATCTATGTCAGAAAAAATAAGCAAGGATACTGTTTTGGCTTTGTTGAATTCCGATCTCAAGATTCAATCAAGAATGCTATTCAGGCTTCACCCGTGAGTTTTGCCGGGTGTCAGGTTGCAGTTGAGATGAAGAGAGGCACTTCTCGAGCTGGCAATGGCACCGGCAATCCTAGAAGAGCTAGAGTGCCATCATCAAGAAGGGGCGGGTTTCGAAATGACAACAACAGGGCAGAAGGTCGTGGTAATTATGGAGAAGCTCATCAGCAAGGCAGGGCAAGGGGTCCCAAGTCAAGTGCACCAAAACCAAATGCTGCTGCTAACTGA 2427 0.4343 MASSKSGRKANEIFKGQALLYTHTYAFVDSMCLKWIIELGIPNIIHNHGRPITLSELVSVLKVPQAKFTTVDRFMRYMAHIGFFEVVRIHDDEAFALTAASELLVKGTDGPCLTPMVECVLDPALSGSFHELGKWIYEENRPLFEVALGMPLWNFLDKNPKHMSLFNDAMASDSGMIKLALKDHKVVFEGLESIVDVGGGTGTMAKIICETFPELKCTVLDLPQVVERSSGTNNLSFVGGDMFESIPKADAVLLKWILHDWSDENCKKILENCKEAVSSKGRRGKIIILDIVINEKEDEPEITRIKLLLDVHMQCLHGKERTKDEWKKLFSAVGFQDYKITPFTGHLSLIEPPPSPSIDQILASRSGRKRVKQMKHKRMAMETASDPTAPSAQLIGHAFVQQYYHILHYSPELVHRFYQDSSLVSRPDSKGEMTTVTTMQGINEVILSLNFKEIQAEIKTAEAQKSYKEGVTVLVTGCLTAKDNKTRSFAQSFFLAPQEKGYFVLNDVFTYIEDHHEPSELHPVNGDGDEVVVSVTPEPEEPINASDPTVALDPENSRIKEGPIVAESVDELSNHLEEQKPDEIEEDPVEPLVQSNGNADSQATKLDSSSAQEDVPKKSYASVVKVQKASGPAMKARPNKTERQPVEKVESAVVPKATPEKVSNSEGEGEHTIYIRNFPISMTAADIEEGFKKFGPIKPGGIYVRKNKQGYCFGFVEFRSQDSIKNAIQASPVSFAGCQVAVEMKRGTSRAGNGTGNPRRARVPSSRRGGFRNDNNRAEGRGNYGEAHQQGRARGPKSSAPKPNAAAN* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3681 808 Gene3D Vaccinia Virus protein VP39 108 354 IPR029063 -
Aev06g3681 808 Gene3D - 1 104 IPR036388 -
Aev06g3681 808 ProSiteProfiles Nuclear transport factor 2 domain profile. 395 511 IPR018222 -
Aev06g3681 808 MobiDBLite consensus disorder prediction 577 668 - -
Aev06g3681 808 Pfam Nuclear transport factor 2 (NTF2) domain 396 511 IPR002075 -
Aev06g3681 808 Gene3D - 383 517 - -
Aev06g3681 808 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 673 730 IPR000504 GO:0003723
Aev06g3681 808 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 109 351 IPR029063 -
Aev06g3681 808 MobiDBLite consensus disorder prediction 746 808 - -
Aev06g3681 808 SUPERFAMILY RNA-binding domain, RBD 661 775 IPR035979 GO:0003676
Aev06g3681 808 MobiDBLite consensus disorder prediction 594 616 - -
Aev06g3681 808 SUPERFAMILY "Winged helix" DNA-binding domain 11 108 IPR036390 -
Aev06g3681 808 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 671 768 IPR000504 GO:0003723
Aev06g3681 808 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 351 - -
Aev06g3681 808 PANTHER O-METHYLTRANSFERASE 2 351 IPR016461 GO:0008168
Aev06g3681 808 SUPERFAMILY NTF2-like 391 512 IPR032710 -
Aev06g3681 808 SMART rrm1_1 672 743 IPR000504 GO:0003723
Aev06g3681 808 CDD NTF2 391 513 IPR018222 -
Aev06g3681 808 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Aev06g3681 808 Pfam O-methyltransferase domain 129 336 IPR001077 GO:0008171
Aev06g3681 808 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 354 IPR016461 GO:0008168
Aev06g3681 808 CDD RRM_SF 673 743 - -
Aev06g3681 808 Gene3D - 637 794 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3681 Aev-Chr6 37277837 37288315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3681 26 351 Monolignol Biosynthesis Gene Families AT5G54160 32.743 1.87e-44 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3681 K24983 K13262 gmx:100813225 481.1