Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3669 ATGATTGATCATAGTCCAAAACAAGAGGGAGGTGGTCATTATTCATCATCATCATCACAATGGCTGAGGTTGAAAGATCCAAGGATTGTTAGAGTATCAAGAGCCTTTGGAGGAAAGGACAGACACAGCAAGGTTTGCACAGTGAGAGGGCTAAGAGACAGGCGTGTGAGGTTATCAGTGCCCACAGCAATTCAGCTTTATGATCTTCAAGACAGGTTAGGGCTGAATCAGCCAAGTAAAGTTGTTGATTGGTTGCTGAATGCAGCTAAGCATGACATTGATGAGCTTCCACCACTTCCAAACATCAACATTCATATTCCATCAAATAACAACTTCACTACTACTCTTGGTGGTTTTCCATCTTCTATGATGATCAATCATAATGTTGAAGATGAGCAACAACTTTTCAATAATAAGGGCATTATTCATCAATTGGGGGAAGGTATTAGCTCAACCCAAAAGCCTAGAGAAGAAGAAGATCAAGAGGAGGACATCAAACAAGGGAGCAATAATAAGGAAGGAGATATTGCAAATGTTTTGGGAGGTAATAATTATAATAATAGTGTGTTATTACCAATAAGACCAAATCATCATCCTTCATTTTTGGGGTTGTTGAATAATGCAACTATGCCAACAATTGGGAACTACCAATGGGAAAGTAGTTCAAGTGATGTTGGTCAATTGGGAAATAATAGCCATCATATTGGATTCACAAACCAACAAGATAATCATGGGAATACTAGTAGTAGTAGTTGTAGTAATAATAATAATCCTCATTCTCATCATCATCATCAGATTTTGGGGTGTCCTAATCCTCCTCATCATGGATCAACAACAACACAGTCATATTTCCCTTGTTCTTCTTCATCATCATCACATCATGTTACAGCAGCAATGGAATTCATGGATCCAATTAGACAAATGAATAACCATTATCAGATGTTGGCCTCATCATCAAGTTCTCATAATCCATCATTCAGCTTCGCTATGATGATGGCTCCCAGGCTTCACACTAGCAGGGAAAGCCCTTCTCATCATCATAAACACCATGAGTTTCCTTCCAAGTGA 1068 0.3876 MIDHSPKQEGGGHYSSSSSQWLRLKDPRIVRVSRAFGGKDRHSKVCTVRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNAAKHDIDELPPLPNINIHIPSNNNFTTTLGGFPSSMMINHNVEDEQQLFNNKGIIHQLGEGISSTQKPREEEDQEEDIKQGSNNKEGDIANVLGGNNYNNSVLLPIRPNHHPSFLGLLNNATMPTIGNYQWESSSSDVGQLGNNSHHIGFTNQQDNHGNTSSSSCSNNNNPHSHHHHQILGCPNPPHHGSTTTQSYFPCSSSSSSHHVTAAMEFMDPIRQMNNHYQMLASSSSSHNPSFSFAMMMAPRLHTSRESPSHHHKHHEFPSK* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3669 355 Pfam TCP family transcription factor 38 158 IPR017887 -
Aev06g3669 355 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 14 348 IPR005333 GO:0003700
Aev06g3669 355 ProSiteProfiles TCP domain profile. 38 96 IPR017887 -
Aev06g3669 355 MobiDBLite consensus disorder prediction 220 262 - -
Aev06g3669 355 MobiDBLite consensus disorder prediction 220 289 - -
Aev06g3669 355 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 14 348 - -
Aev06g3669 355 MobiDBLite consensus disorder prediction 147 179 - -
Aev06g3669 355 MobiDBLite consensus disorder prediction 272 289 - -
Aev06g3669 355 MobiDBLite consensus disorder prediction 152 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3669 Aev-Chr6 37215334 37216401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3669 21 163 TCP Transcription Factor Family AT3G02150 58.904 2.54e-46 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aev06g3669 TCP 1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3669 - - var:108327895 245.743