LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev06g3654	ATGAATACAAAGTCACAGCAAAGGTTTTCTTTGGGAGTGGCTGAAATTTTCGCCACCAGCCATACAAAACAATACAGAAATGATGCAAGCATGGCCTTACTTGGACTAGTACCAAAACTGTGTGCACCAGTAGAGTACTTCTTCACCAATGCACAATTTGGTAACAAACCGGAACTGATTTACAATCCTAGTGATGACTATAGTATCAACTGCGGCTCCTCCCAACACTTCTCCTTCGACGGTCGGAATTGGACTGCAGACATTAACAAACTCGTCTCAGAAACCTCATCATCATCATCATCAGTTGCTGCTAATGTACTCACACCAAGTACCATTCAGGGCCCTTACACCTCAGCTCGTGTCTCATACTCCCAATTCACATACTCATTCCCTATCACCACCTCTGGCCCAAAGTTCATTCGCCTCTTCTTCTACCCAACCTCATACCAAAACTTCGATCCAACCAAAACCCTGTTCTCTGTGAAATCAGGTGATTACACTCTCCTCAAAGATTTCAACGCTACACTCTACGCTGACGCTGATGATGAACCCTCTGATACCTTCTTCAGAGAGTACAGTGTCAACGTCCAAGATGGTGATAAGGTGCTTAGCATTACTTTCATTCCAAGCTCATCATCAAATAATAAAACTTCATCATCAGGTCCCTATGATTATTATGCCTTCATCAACGGAATCGAGGTGGTTTCAATGCCACCTTATCTCTACTATACCAAACCCGATGACAGAGGATTGAAGTTAGCTGGGTCCACCATCCCATACACCGTGGACAACAACACAGCGCTTGAGACAAAGTACCGTGTCAACGCTGGAGGGAGGACAATCTCCCCTTCTGGTGACACCGGCATGTTTAGGAATTGGGTTGGAGATGATAATTACTTAGCTTCACGTAGTGGACTTGCCGTTGACTACGGTGGATCAACCAAACTCAACTTCTCCATGGTCCCGCAGTACACTGCTCCCGACGAACTCTACAGAACTCTGCGCCACATGGGAGAGAATGCCACCATCAACTTGGGATTCAACCTCACCTGGGACTTCCCCGTTGATTCAGGCTTCACCTACATGTTAAGGCTCCACTTCTGCGAGCTCGACCCCAATATTCAAAAGGCAGGTGAAAGAAGATTCTTCATATACATACAGGATCAGATGGTTGAGAGCAACGCAGATGTTCTCTTATGGACTAGTGGACAAAGGGCTACACCCACTGTTAAAGACTATGCGGTGATTGTCCCACCAGTAGGGGATCACAAAAACGCAAACATTTCATTGAAGATGAGTACTCTCCCAAAGAGCCTATACGCAGACTCTGTTCTCAACGGCCTTGAACTCTTCAAGATCAACGACTCCCTCGGGAACCTCGCTGGCCCTAACCCTGAGCCTCGTCCGAAGTCCTCGCCAAGCCCACCGGGTACCCCTTCAAAGAAAAGCAGCAGCAAGAATATTGGTGCCGCGGTTGCTGGTGCAGTTTCTGGTGTTGTTTTGCTGTTATTAGTTCTCGCCGTCGCTCTCTTCCTCATCAGAAGACGCGACGAGAAATTCTACGACAAGGGCTATTCAAGTAGTAATTCCAAGTATAAATCAGAAGGTGGTGGTGCGAATTCACTACCTTCGGATCTCTGCCGCCACTTCTCAATAGAAGAAATCAGAGCCGCCACAAACAACTTCGATGACCTCTTCGTCGTTGGTGTTGGAGGGTTTGGGAACGTGTACAAAGGCTACATCGACGGTGGTGCAACACCGGTTGCGATCAAACGGTTGAAACCGGGTTCACAGCAAGGTGCGCACGAGTTCATGAACGAGATCGAGATGCTCTCTCAGCTGCGCCACCTGCACCTCGTCTCCCTCATCGGTTACTGCTACGAGAGCAACGAGATGATCCTGGTCTACGATTTCATGACACGTGGCACTTTGCGCGATCATCTCTACAACACTGATAACCCTTCCCTCTCGTGGACGAAGAGGATCGAGATATGCATTGGTGCGGCGCGTGGGCTGCACTACCTCCATACAGGCGCGAAGCACATGATCATTCATCGCGACGTCAAGAGCACTAATATCTTGTTGGATGAGAAGTGGATCGCCAAGGTTTCGGATTTCGGGTTATCGAGGGTTGGGCCTACGGGTACGTCCATGACACACGTGAGCACCGTAGTGAAGGGGAGCGTGGGGTACTTGGATCCTGAGTATTATAAACGGCAGCGTTTGACTGAGAAGTCTGACGTGTACTCTTTTGGCGTGGTGTTGCTGGAGGTGTTGTGTGGGAGGGCGCCTTTGTTGCGTAACGTGGACAAGAGACACGTGTCGCTTGTTGATTGGGCAAGGCGGTGCAATCACTTGGGGGCGGTTGAGGAGATCGTGGACCCTGCAATAAAGGGTGAGATTGCGCGTGAGTGCTTAAGGAAGTTTAGTGAGCTTGCTCTGAATTGTTTGCTTGATGATGGGAGTAAGAGGCCGTCCATGAACGACGTCGTTGGGGTGTTGGAGTTTGTTCTGCAACTTCAGGAGAATTCTGTTGTGAGTGGAGGAGGGGTGGTTAAGGAGGATCGTGGGAAACGCGAGGAGGATAGTGATGAGGTGGCGTTCAGTAGTAGCAGCACAAGTGGACTTGTGTGGGATAATAGCAAGAGCAGTGGAGTGAGCATGACAAGTAGCGGAGAACATAGCTATGGGAGTTCAGATACTAAGTGGTTAATGTCCAACAATGTTTTCTCTGAGATTGGAGATCCAAAGGGACGGTGA	2760	0.488	MNTKSQQRFSLGVAEIFATSHTKQYRNDASMALLGLVPKLCAPVEYFFTNAQFGNKPELIYNPSDDYSINCGSSQHFSFDGRNWTADINKLVSETSSSSSSVAANVLTPSTIQGPYTSARVSYSQFTYSFPITTSGPKFIRLFFYPTSYQNFDPTKTLFSVKSGDYTLLKDFNATLYADADDEPSDTFFREYSVNVQDGDKVLSITFIPSSSSNNKTSSSGPYDYYAFINGIEVVSMPPYLYYTKPDDRGLKLAGSTIPYTVDNNTALETKYRVNAGGRTISPSGDTGMFRNWVGDDNYLASRSGLAVDYGGSTKLNFSMVPQYTAPDELYRTLRHMGENATINLGFNLTWDFPVDSGFTYMLRLHFCELDPNIQKAGERRFFIYIQDQMVESNADVLLWTSGQRATPTVKDYAVIVPPVGDHKNANISLKMSTLPKSLYADSVLNGLELFKINDSLGNLAGPNPEPRPKSSPSPPGTPSKKSSSKNIGAAVAGAVSGVVLLLLVLAVALFLIRRRDEKFYDKGYSSSNSKYKSEGGGANSLPSDLCRHFSIEEIRAATNNFDDLFVVGVGGFGNVYKGYIDGGATPVAIKRLKPGSQQGAHEFMNEIEMLSQLRHLHLVSLIGYCYESNEMILVYDFMTRGTLRDHLYNTDNPSLSWTKRIEICIGAARGLHYLHTGAKHMIIHRDVKSTNILLDEKWIAKVSDFGLSRVGPTGTSMTHVSTVVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLLEVLCGRAPLLRNVDKRHVSLVDWARRCNHLGAVEEIVDPAIKGEIARECLRKFSELALNCLLDDGSKRPSMNDVVGVLEFVLQLQENSVVSGGGVVKEDRGKREEDSDEVAFSSSSTSGLVWDNSKSSGVSMTSSGEHSYGSSDTKWLMSNNVFSEIGDPKGR*	920

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev06g3654	919	CDD	STKc_IRAK	577	835	-	-
	Aev06g3654	919	MobiDBLite	consensus disorder prediction	852	866	-	-
	Aev06g3654	919	MobiDBLite	consensus disorder prediction	849	901	-	-
	Aev06g3654	919	ProSitePatterns	Protein kinases ATP-binding region signature.	568	591	IPR017441	GO:0005524
	Aev06g3654	919	Pfam	Protein tyrosine and serine/threonine kinase	568	832	IPR001245	GO:0004672\|GO:0006468
	Aev06g3654	919	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	683	695	IPR008271	GO:0004672\|GO:0006468
	Aev06g3654	919	Gene3D	-	267	454	-	-
	Aev06g3654	919	Gene3D	-	66	237	-	-
	Aev06g3654	919	Gene3D	Transferase(Phosphotransferase) domain 1	639	850	-	-
	Aev06g3654	919	MobiDBLite	consensus disorder prediction	459	485	-	-
	Aev06g3654	919	Pfam	Malectin-like domain	69	453	IPR024788	-
	Aev06g3654	919	SUPERFAMILY	Protein kinase-like (PK-like)	542	837	IPR011009	-
	Aev06g3654	919	PANTHER	CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN	59	872	-	-
	Aev06g3654	919	MobiDBLite	consensus disorder prediction	867	901	-	-
	Aev06g3654	919	ProSiteProfiles	Protein kinase domain profile.	562	837	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev06g3654	919	Gene3D	Phosphorylase Kinase; domain 1	547	638	-	-
	Aev06g3654	919	SMART	serkin_6	562	837	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev06g3654	919	PANTHER	OS07G0166700 PROTEIN	59	872	IPR045272	GO:0004714\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev06g3654	Aev-Chr6	37121017	37124140	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev06g3654	61	919	Receptor kinase-like Gene Family	AT3G51550	49.215	0.0	775

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Aev06g3654		Malectin_like	2.3e-33	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev06g3654	-		-	gmx:100305394	996.112