Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3648 ATGGGCTTCTCTTTGATGCATTGCTTTGTGTTACTGTTCCTACTTTCTTGCACTTGCTTCACTTCAACAGATGCTTATGATGCACTTGACCCAAATGGGAATATCACAATCAAATGGGATATTATAAGTTGGACACCTGATGGTTATGTTGCTGTTGTTACAATGAACAACTTCCAACAATACCGTCACATTGCATCGCCTGGCTGGTCACTAGGATGGACATGGGCAAAGAAGGAGGTTATATGGAGCATGATGGGAAGTCAGACTACTGAGCAAGGAGACTGTTCGAAATTTAAGGGAAACGTCCCGCATTGCTGTAAAAAGGATCCAACCGTTGTGGATTTGCTTCCTGGCACACCATACAATCAGCAAATTGCAAACTGCTGCAAAGGTGGAGTGCTTAGCTCTTGGGTTCAGGATCCGACCAATGCAGTCTCATCGTTTCAAGTCAGTGTAGGTAGAGCTGGTACCACCAACAAAACTGTCAAGGTGCCGAAAAACTTCACCTTGAAAGCGCCAGGTCCTGGTTATACTTGTGGTCCAGCGAAAATTGTGAGACCAACTCAGTTCATTCAACCAGACAAGAGGAGAGTAACACAAGCACTAATGACGTGGAATGTGACATGCACATATTCACAGTTTCTAGCCCAGAAAACTCCCACTTGCTGTGTCTCCCTCTCATCATTCTATAATGATACTGTTGTGCCCTGCCCAACATGTGCATGTGGCTGCCAGGGCAACTCATCTCAGTCAGGGACCTGTGTAAATTCTGATACGCCACATTTGGCATCAGTGGTTTCTGGAAAGAATAATTTGGCACCTTTAGTTCAATGTACTAGTCATATGTGTCCGGTCAGGATTCACTGGCACGTTAAGCTTAACTACAAGGAGTACTGGCGCGTGAAGGTCACCATTACTAATTTCAATTACAGGATGAATTATTCTGAGTGGAACTTGGTTGTTCAACACCCGAACTTCGATAATCTGACTCAACTGTTCAGTTTCAACTACAAATCATTAACTCCTTATGGATCAATAAATGATACTGCTATGCTTTGGGGAGTTAAGTTCTATAATGATTTTCTCAATGAAGCTGGCCCTATGGGGAATGTACAATCAGAGCTACTCTTCCGAAAGGATAAATCAACTTTCACGTTCGAGAAGGGCTGGGCTTTCCCTCGGAGGATCTATTTCAACGGTGACAACTGTGTGATGCCACCACCCGATGCTTATCCAACATTACCTAATGCTGGTTCTCAGAAAGAGGTTTCCTTGCTCGTTTTAGTGATGGCTTGTTTGGTTTCCCTGGTATTTTATGCACATGCTTGA 1329 0.4379 MGFSLMHCFVLLFLLSCTCFTSTDAYDALDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHIASPGWSLGWTWAKKEVIWSMMGSQTTEQGDCSKFKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWVQDPTNAVSSFQVSVGRAGTTNKTVKVPKNFTLKAPGPGYTCGPAKIVRPTQFIQPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTVVPCPTCACGCQGNSSQSGTCVNSDTPHLASVVSGKNNLAPLVQCTSHMCPVRIHWHVKLNYKEYWRVKVTITNFNYRMNYSEWNLVVQHPNFDNLTQLFSFNYKSLTPYGSINDTAMLWGVKFYNDFLNEAGPMGNVQSELLFRKDKSTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPTLPNAGSQKEVSLLVLVMACLVSLVFYAHA* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3648 442 Pfam COBRA-like protein 49 212 IPR006918 GO:0010215|GO:0031225
Aev06g3648 442 PANTHER COBRA-LIKE PROTEIN 5 441 - -
Aev06g3648 442 PIRSF COBRA 1 442 IPR006918 GO:0010215|GO:0031225
Aev06g3648 442 PANTHER PROTEIN COBRA 5 441 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3648 Aev-Chr6 37090145 37093025 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3648 11 442 COBRA Gene Family AT3G02210 75.632 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3648 - - gmx:100783820 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3648 06 37090145 37093025 Aev06g3648 06 37090145 37093025 ECH
Aev05g2554 05 27021445 27024769 Aev06g3648 06 37090145 37093025 PCT