Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3635 ATGGGAAGAGGTAGGGTTCAGCTGAAGCGGATCGAGAACAAAACAAGTCAACAAGTGACATTCTCAAAGAGAAGAACAGGACTTCTCAAGAAAGCTCACGAAATCTCTGTGCTTTGTGATGCTCAAGTTGCCTTAATTATGTTCTCTACCAAAGGAAAGCTTTTTGAGTATTCCTCTGAATCAAGCATGGAAGACATTCTGGAACGATATGAAAGACATGCTCATGCCGAATTTGCTAGAGCTAATAACAATGAACCTCCAGAGGGAAACTGGTCTTACGAATACATCAAGCTCACAGCTAAAGTTGAAGTCTTAGAGAAGAACATAAGGAACTTTGTGGGAAATGAGCTTGAGCCGTTGAGTTTGAGAGAGCTTCAGACTTTGGAGCAGCAACTTGACGCTGCTCTTAAGCGTATCCGAATAAGAAAGAATCAAGTTATGAATCAATCCATCTCTGAGATGCATAAAAAGGCAAGGGCATTGCAGGAGCAAAACAACGTGCTATCAAAGAAGATGAAGGAGAAAGAGAGGATCCTGGGACAAAGTTCATCTGCCATCGACTTATCTCCTCCGGATCACCTACCACCACAAATTAGACTTCCTAATTGTCTTAATCTCAGTGGGACAGGAGAAGGAAGAGGCATGATGGAGGGAAGGGGTGAAGCAGCACAAGTTGGTGGTACCAACACTACTGTCATCCCTCCATGGATGCTCCATCACTTGACAACTTAG 732 0.4344 MGRGRVQLKRIENKTSQQVTFSKRRTGLLKKAHEISVLCDAQVALIMFSTKGKLFEYSSESSMEDILERYERHAHAEFARANNNEPPEGNWSYEYIKLTAKVEVLEKNIRNFVGNELEPLSLRELQTLEQQLDAALKRIRIRKNQVMNQSISEMHKKARALQEQNNVLSKKMKEKERILGQSSSAIDLSPPDHLPPQIRLPNCLNLSGTGEGRGMMEGRGEAAQVGGTNTTVIPPWMLHHLTT* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3635 243 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Aev06g3635 243 ProSiteProfiles K-box domain profile. 88 178 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev06g3635 243 PANTHER TRUNCATED TRANSCRIPTION FACTOR CAULIFLOWER A-LIKE ISOFORM X1 1 212 - -
Aev06g3635 243 Gene3D - 13 85 IPR036879 GO:0003677|GO:0046983
Aev06g3635 243 Coils Coil 122 178 - -
Aev06g3635 243 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Aev06g3635 243 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Aev06g3635 243 CDD MADS_MEF2_like 2 76 IPR033896 GO:0000977|GO:0045944
Aev06g3635 243 SUPERFAMILY SRF-like 2 84 IPR036879 GO:0003677|GO:0046983
Aev06g3635 243 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Aev06g3635 243 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Aev06g3635 243 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Aev06g3635 243 PANTHER MADS BOX PROTEIN 1 212 - -
Aev06g3635 243 Pfam K-box region 88 172 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3635 Aev-Chr6 36992270 36997091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3635 1 179 MADS-box Gene Family AT1G26310 61.878 4.83e-76 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Aev06g3635 K-box 3.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3635 K09264 - gmx:100786580 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3635 06 36992270 36997091 Aev01g2204 01 26369099 26377146 ECH
Aev06g3635 06 36992270 36997091 Aev06g3635 06 36992270 36997091 ECH
Aev05g2539 05 26859706 26874813 Aev06g3635 06 36992270 36997091 PCT