Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3625 ATGGCTAGGTCTGCCAAAGGGCAGCAAGAAGAATTTGACGACGACGACGAAGAGCACTTCACTCCCAACTCCTCTTCTCCTCACAAAGTGAAGATGGATGAACCAAACAGTGGGAAGAGGGTGAACCCTCATCGTTCCAAGCATTCAGAGACTGAGCAGCGTAGAAGGAGCAAGATTAACGAAAGATTTCAGGTTTTAAGAGATCTTATACCCCAAAATGATCAAAAAAGAGATAAAGCGTCCTTCTTGTTGGAGGTTATTGAGTATATTCAGTTTCTACAGGAGAAGTTACAAATTTATGAACAAACTTATGAAGGGTGGAATCAGGAGCCAACCAAATTAATTCCATGGAGAAATCATCATGGGCCCTCAGAAAATATTACAGATCCTTCTCAAGCTATACAAAATGGATCTGCTCATGAGAAAAATGATGATATCCCTCCATCATTACATAGAAATGTACAGAACCCGTTAGAGTCGGACTTGTCAATAACTACTATCCACAAGGGTCACACCATTGGTTCAGCTGCAGAAGCAGTTCCATTGGTCATGCCAATGAGACTAGACATGTTTGACCCAGTTGTAAGCAGCGGTATCCCAACCCAACGTCTTCAGCAACCTATGTCTAATGCTGACATGCTGCCTTCCCATACCCAGCCCCAAGTTTTGCTCGGCAAACCGGATAGGGGCAACTATATTGTTCCGGATAATATACTGAAGGAACAAGAGGAGCTGACAATTGAAACTGAATCAGATAACATATCAAATGCCTATTCTCAAGGAATATTAGATACTCTCACACAAGTGCTGCAGTCTTCGGGTGTGGATCTGTCTCAGACTAATGTCTCAGTGCAAATTGATGTTGGTAGACGAGCAAATACAGGGTTGACCCCTTCTGCATCTAGCTCAAAGGGTTATGCAAACCAAGTTGTAAGCAACCGAGCAATATCATGTTCAGGAGTTAACTATTGCAGTGAGGATTCTGAACAAAGTCCAAAGAGGCTCAGAAGAGATGAAAGCTAG 1023 0.4282 MARSAKGQQEEFDDDDEEHFTPNSSSPHKVKMDEPNSGKRVNPHRSKHSETEQRRRSKINERFQVLRDLIPQNDQKRDKASFLLEVIEYIQFLQEKLQIYEQTYEGWNQEPTKLIPWRNHHGPSENITDPSQAIQNGSAHEKNDDIPPSLHRNVQNPLESDLSITTIHKGHTIGSAAEAVPLVMPMRLDMFDPVVSSGIPTQRLQQPMSNADMLPSHTQPQVLLGKPDRGNYIVPDNILKEQEELTIETESDNISNAYSQGILDTLTQVLQSSGVDLSQTNVSVQIDVGRRANTGLTPSASSSKGYANQVVSNRAISCSGVNYCSEDSEQSPKRLRRDES* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3625 340 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 43 93 IPR011598 GO:0046983
Aev06g3625 340 CDD bHLH_AtBIM_like 45 118 - -
Aev06g3625 340 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 44 122 IPR036638 GO:0046983
Aev06g3625 340 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 339 IPR044295 GO:0003700|GO:0006351|GO:0046983
Aev06g3625 340 Pfam Helix-loop-helix DNA-binding domain 45 94 IPR011598 GO:0046983
Aev06g3625 340 Gene3D - 42 114 IPR036638 GO:0046983
Aev06g3625 340 SMART finulus 49 99 IPR011598 GO:0046983
Aev06g3625 340 MobiDBLite consensus disorder prediction 124 139 - -
Aev06g3625 340 MobiDBLite consensus disorder prediction 32 59 - -
Aev06g3625 340 Coils Coil 90 110 - -
Aev06g3625 340 MobiDBLite consensus disorder prediction 1 59 - -
Aev06g3625 340 MobiDBLite consensus disorder prediction 118 154 - -
Aev06g3625 340 PANTHER TRANSCRIPTION FACTOR BIM3 1 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3625 Aev-Chr6 36929760 36932324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3625 3 304 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 42.020 6.84e-59 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev06g3625 HLH 1.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3625 - - gmx:100791730 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3625 06 36929760 36932324 Aev06g3625 06 36929760 36932324 ECH