Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3595 ATGTTGGAGGAGGACACATGCCACAACACCAACACAAGCTGGACGGCACGCGTGTGCGACACGTGCCGCTCAGCTGCGTGCTCGGTGTTCTGCCGAGCTGACTCCGCATACCTTTGCGCCAGCTGTGACGCACGTGTCCACGCGGCAAACCGCGTGGCCTCGCGTCACGAGCGCGTGTGGGTATGCGAAGCCTGCGAGCGGGCCCCGGCCGCGTTCCTCTGCAAGGCGGACGCGGCGTCGCTATGCTCTACCTGCGACGCCGACATCCATTCCGCCAACCCTCTTGCCAGCCGTCACCATAGGGTGCCAATTGGGTCTCTCTACGGCAGCCCACCGCCGCATGAGGCCCAATTAGGCCCAAATGGTGACGGGCTCGGGGGATGTGAGGTTGAGATGATGGAGAATGATGAAGATGAGGAGAATGATGAGGATGAGGCTGCTTCTTGGCTGTTGCTGAATCCGTTGAAGAACAATAACGGAAGTATCAACCTGAATGGAAATAACGGGCAGAATCAACAAGGGAATAACAGTTATCTGTTTGGTGGGGAGGTTGATGAGTATTTGGACCTTGTGGATTGTAGTAATTCATGTGGTGGTGATGAAAACAACAGCAACAACAATAATCAGTATGTTGAAAGTGATCATTATGGCCATCAGAATCAGTATGGTGTTGTTGGGCAGAAAAGCTATGGTGGTGGTGATAGTGTGGTTCCAGTTCAGCAGGGGCACCACCATTTTCACCTTGGCTTGGAGTTTGAACCTTCCAAAGCTGGATTCAGTTACAATTCTTCAATTACTCAAAGTGTTTCAGTTTCATCAATGGATGTTGGAGTTGTGCCAGATTCAACACTAAGCAATATTTCAATTTCGCACTCAAGACCACCAAAAGGAACAATAGACCTATTCTCAGGACCCCAAATTCATCAAATGGCTTCACATCTGACACCAATGGACAGAGAAGCCAGAGTTCTAAGGTACAGAGAGAAAAAGAAGAACAGGAAATTTGAGAAGACAATAAGGTATGCATCAAGAAAAGCCTATGCAGAGACAAGACCTCGCATAAAAGGTAGATTTGCAAAGAGAACTGATGTAGAAGCTGAAGTTGACCAAATGTTCTCATCATCACTCATTACTGATGTAGGCTATGGAATTGTACCCTCATTCTGA 1167 0.4893 MLEEDTCHNTNTSWTARVCDTCRSAACSVFCRADSAYLCASCDARVHAANRVASRHERVWVCEACERAPAAFLCKADAASLCSTCDADIHSANPLASRHHRVPIGSLYGSPPPHEAQLGPNGDGLGGCEVEMMENDEDEENDEDEAASWLLLNPLKNNNGSINLNGNNGQNQQGNNSYLFGGEVDEYLDLVDCSNSCGGDENNSNNNNQYVESDHYGHQNQYGVVGQKSYGGGDSVVPVQQGHHHFHLGLEFEPSKAGFSYNSSITQSVSVSSMDVGVVPDSTLSNISISHSRPPKGTIDLFSGPQIHQMASHLTPMDREARVLRYREKKKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMFSSSLITDVGYGIVPSF* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3595 388 CDD Bbox1_BBX-like 18 61 - -
Aev06g3595 388 Pfam CCT motif 319 361 IPR010402 GO:0005515
Aev06g3595 388 ProSiteProfiles Zinc finger B-box type profile. 57 104 IPR000315 GO:0008270
Aev06g3595 388 SMART bboxneu5 14 61 IPR000315 GO:0008270
Aev06g3595 388 SMART bboxneu5 62 104 IPR000315 GO:0008270
Aev06g3595 388 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 1 15 388 - -
Aev06g3595 388 CDD Bbox1_BBX-like 61 104 - -
Aev06g3595 388 ProSiteProfiles CCT domain profile. 319 361 IPR010402 GO:0005515
Aev06g3595 388 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 15 388 IPR045281 GO:0009909
Aev06g3595 388 ProSiteProfiles Zinc finger B-box type profile. 14 61 IPR000315 GO:0008270
Aev06g3595 388 Pfam B-box zinc finger 59 104 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3595 Aev-Chr6 36713181 36715352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3595 1 388 C2C2-CO-like Transcription Factor Family AT3G02380 54.000 3.92e-126 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Aev06g3595 zf-B_box 5.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3595 - - ahf:112744683 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2509 05 26542196 26544186 Aev06g3595 06 36713181 36715352 PCT