Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3580 ATGAGATTTCATCAATCAATACAACTTGTACATCATTGGAAATACACCTCAGGAAACATTACAAAGAGTATTATCCTTCTTCCATTCTTTGTTCTGTTTTTCATCATAATATTCCCATCATTCATCATCATAATATATCCACAACACCAACCACTTCCCAAGATATCTTCAAACACCACAGAAATAAAGAGATGCAATAACATATTCTCCGGAGAATGGATTCCTTTTAGTAAAGGGCCTTATTACAATAATGAGACATGCAATTTGATAATAGACCAACAAAACTGCCTCAAGTTTGGAAGACCTGACAGAGAATTCCTCTATTGGAGATGGAAGCCATATGAATGTGATGAGCTTCCACTCTTTGATGCAACTCTTTTCTTGGAGATTGTTAAAGGAAAGTCTATGGCTTTTGTTGGAGATTCAGTTGGAAGAAACCAGATGAATTCATTGTTGTGCCTTCTAAATCTTGTTGCTGAGGCAGAGGATATTTCCAAGAGATATGCAACAGATGCCATATATTTCAGGAGGTGGTTCTATGCTGACTACAATTTTACTCTTGTTACACTTTGGTCCCCATTTTTGGTGAGAACTAGTGATGCTGACTCCAATGGTCTCATGAACCTTCATCTAGATAAGGCAGATGAAGCATGGACTAATGAAATTGAGAATTTTCACTTTGTCATTATATCAGCTGGCCAATGGTTCTTTAGGCCACTAGTGTTCTATGAAAATGACCAAATTGTTGGTTGCCACAAATGTGGACACAAGAGAATTAAAGACCTTACACATTACTATGGATATAGAATGGCATTTAGAACTGCATTCAGAACAATTATGAATCTCAAAGGGTATAAGGGGCTTACATTTTTTAGGACATTCTCCCCTGCTCATTTTGAGAATGGTGAATGGAATAAAGGAGGGAAATGTGATAGGACAAAGCCTTATACTAAAGAAGAGATGAATCTTAATGGAAAGAGAGATGAGGGGAGAGAGAGGGAGGACGGCAAGAAGAGAAAGGGCGAGATCGCGCCGGAGATGAAGGGCCGCCGTGGCTTCAAGGGAGGTGAGAGAGGAGTGAGTCGCGGCTGGAGTTCCATGGCCGACGGAGGGGGAAGGTCCTGGTCGCGGCTGGAGGCCAGATTCAGAGAAACCGTGGTAACCATATTTCTTTATTATCTCTGCAAGTTTTTTAGGCTTGAAGGGTGTGTTAAGGAAGTGATTGCTGAAATGAATGAATCTACAGTGAAGAATTCCTCAATCACAGAGATGAAGCCACATAAACAAGGTGGTTGTGGTGGCATTATCTATCAGCTCTTTGAATGGAAGAGGAAACTCGCCAAGAAAAAGCTCTTCTCTAACAAACTTCTGCCTCCCGGTTAG 1383 0.4056 MRFHQSIQLVHHWKYTSGNITKSIILLPFFVLFFIIIFPSFIIIIYPQHQPLPKISSNTTEIKRCNNIFSGEWIPFSKGPYYNNETCNLIIDQQNCLKFGRPDREFLYWRWKPYECDELPLFDATLFLEIVKGKSMAFVGDSVGRNQMNSLLCLLNLVAEAEDISKRYATDAIYFRRWFYADYNFTLVTLWSPFLVRTSDADSNGLMNLHLDKADEAWTNEIENFHFVIISAGQWFFRPLVFYENDQIVGCHKCGHKRIKDLTHYYGYRMAFRTAFRTIMNLKGYKGLTFFRTFSPAHFENGEWNKGGKCDRTKPYTKEEMNLNGKRDEGREREDGKKRKGEIAPEMKGRRGFKGGERGVSRGWSSMADGGGRSWSRLEARFRETVVTIFLYYLCKFFRLEGCVKEVIAEMNESTVKNSSITEMKPHKQGGCGGIIYQLFEWKRKLAKKKLFSNKLLPPG* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3580 460 Pfam PMR5 N terminal Domain 64 117 IPR025846 -
Aev06g3580 460 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 119 332 IPR026057 GO:0016740
Aev06g3580 460 MobiDBLite consensus disorder prediction 315 343 - -
Aev06g3580 460 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 17 328 - -
Aev06g3580 460 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 17 328 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3580 Aev-Chr6 36617393 36626115 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3580 407 460 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 50.000 5.23e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3580 - - gmx:100784342 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3580 06 36617393 36626115 Aev06g3580 06 36617393 36626115 ECH