Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3564 ATGGATCCAAGAAGGCATGGAAAGGAGGCACAAGAGAGAAATGATGAAGAAAATGAGGTTGATGCTTATTATGCTTATGAAGCATCATCTACTTGGTGCTCATCATCATCAGATACTGACATGTCTGCTATGGTTTCTGCTCTTGCTCAAGTTATGGCAACTTCTAATAGTAATACCAATCAGAGCCCAACATCAATTGTGATGCCACACTCAACTACTACTACTACTACTTCTATGCTCAACAAGGAACACCTACACCTACACCAACAACCACAATCTCAATCTCTTCAACAAAATCAAGAGAGTAGCAAAAAGAAACCACACTACAGAGGAGTAAGACAGAGACCATGGGGGAAATGGGCAGCAGAAATCCGAGACCCAAAAAAGGCAGCAAGAGTATGGCTTGGAACCTTTGACACGGCAGAAGATGCTGCCTTAGCCTATGACAGAGCAGCCCTCAAATTCAAAGGCACTAAAGCCAAACTCAATTTCCCCCAAACACTCAATATTCTTCAAGAACAACAACAACAAGCTTCTACTAATAATAATACTAATACTAATATTCCAACATCTAGTGCTATTGAAGAACAGAGCCTCTATGGTGGTAGTAGTGCTACTCCAACATCGCATCAAAACTATGATCATCAGGTTTTTCCAAACCTCTTTCAGTATGCACAGATTCTCTCAAGTGATGAGGCAGAGCTCCCATATTACACATCACACCTCTTCGACAATCAACAACAACAACCTTTCACTACTTCTTCATCATCTTATAATTACTTCTACAATGACCAACAACAACAACATCATCACCATGAGGAACATCATCGGAAAGACCAATAG 843 0.4057 MDPRRHGKEAQERNDEENEVDAYYAYEASSTWCSSSSDTDMSAMVSALAQVMATSNSNTNQSPTSIVMPHSTTTTTTSMLNKEHLHLHQQPQSQSLQQNQESSKKKPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAALAYDRAALKFKGTKAKLNFPQTLNILQEQQQQASTNNNTNTNIPTSSAIEEQSLYGGSSATPTSHQNYDHQVFPNLFQYAQILSSDEAELPYYTSHLFDNQQQQPFTTSSSSYNYFYNDQQQQHHHHEEHHRKDQ* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3564 280 Gene3D AP2/ERF domain 108 167 IPR036955 GO:0003700|GO:0006355
Aev06g3564 280 MobiDBLite consensus disorder prediction 1 20 - -
Aev06g3564 280 SUPERFAMILY DNA-binding domain 108 166 IPR016177 GO:0003677
Aev06g3564 280 PRINTS Ethylene responsive element binding protein signature 109 120 IPR001471 GO:0003700|GO:0006355
Aev06g3564 280 PRINTS Ethylene responsive element binding protein signature 131 147 IPR001471 GO:0003700|GO:0006355
Aev06g3564 280 PANTHER DNA-BINDING DOMAIN 25 271 IPR044808 GO:0003700|GO:0009873
Aev06g3564 280 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 25 271 - -
Aev06g3564 280 MobiDBLite consensus disorder prediction 84 116 - -
Aev06g3564 280 CDD AP2 107 167 IPR001471 GO:0003700|GO:0006355
Aev06g3564 280 ProSiteProfiles AP2/ERF domain profile. 108 165 IPR001471 GO:0003700|GO:0006355
Aev06g3564 280 MobiDBLite consensus disorder prediction 1 21 - -
Aev06g3564 280 MobiDBLite consensus disorder prediction 84 102 - -
Aev06g3564 280 Pfam AP2 domain 107 157 IPR001471 GO:0003700|GO:0006355
Aev06g3564 280 SMART rav1_2 108 171 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3564 Aev-Chr6 36482465 36484564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3564 97 243 AP2-EREBP Transcription Factor Family AT5G13330 52.703 1.39e-42 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev06g3564 AP2 7.6e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3564 - - lang:109354067 197.978