Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3562 ATGGTTTTGGAGGAGCCAGTTAAGCTCGAGGGCGAACATCACGGCGCCGTCAACGGAACGCCGCTTTCAGTGGCGGTTGACGGCGGTGATGACGGGAGACCCACGGCCAGGCTGCCTCGGTGGACGCGCCAGGAGATCCTCGTCTTAATTCAGGGGAAAACCGATGCTGAGAGAAAGTTCAGGCCTGGTCGGTCCTCCGTCGTAGGCGGCGGTTCTCCGGCTATGGGTTCGCCGGAGCCGAAGTGGGCGCTGGTATCTTCGTACTGCAAGAAGCACGGAGTGAACAGGGAACCTGTTCAGTGCCGGAAGCGGTGGAGCAACCTCGCCGGTGATTTTAAGAAGATCAAGGAGTGGGAGTCTCATGCGAGGGACGAAACGGAGTCGTTTTGGGCGATGAGGAACGATATGAGGAGGGAGAGGAAATTGCCAGGGATTTTTGATAGGGAGGTGTACGAGATACTCGATGCCGCGGCGTCTGGGACGGCGGTTCCGGCTATTTCTACGGCGGCGGTGACGGTGGCTGTGTCGGCGGCGGAGGAGGCGGAGGGTGGGGGTGATGCGGAGGTGCACATTTATGACAGTAATAGGAGGGTGGCAGGGGAAGATGGGTTGTTCTCAGATGGTGAAAGAGACGAGGTTTTTGCTGCTGCTGCTAAGGATGTTCCTGTTCCTGTTGTTCCCATCTCAGAAAAGCAATATCAACCAGTCCTCCAAGGCTGCCAAGGGGAAGACAATGCTCAAGGTGCTGCCAATGAGAAACAGCCAGCCTCAAATCCAGAAATGGGTTCGACATCTCAAGGAGAAAGGAAGAGAAAGCGGTTCGCCACCGATGTAGAGGAGGAAACTCTGCAGAGTCAATTAATTGATGTCTTGGAAAGAAATGGCAGGATGCTGCGCGATCAACTCGAAGCACAGAACATCAATTTCCAGCTGGATCGGCAGCAGCAGAAAGACACTGCGAGTAACATTGTTGCTGTACTTGGTAAGCTTGCAGATGCACTAGGAAGAATTGCTGATAAACTATGA 1026 0.5458 MVLEEPVKLEGEHHGAVNGTPLSVAVDGGDDGRPTARLPRWTRQEILVLIQGKTDAERKFRPGRSSVVGGGSPAMGSPEPKWALVSSYCKKHGVNREPVQCRKRWSNLAGDFKKIKEWESHARDETESFWAMRNDMRRERKLPGIFDREVYEILDAAASGTAVPAISTAAVTVAVSAAEEAEGGGDAEVHIYDSNRRVAGEDGLFSDGERDEVFAAAAKDVPVPVVPISEKQYQPVLQGCQGEDNAQGAANEKQPASNPEMGSTSQGERKRKRFATDVEEETLQSQLIDVLERNGRMLRDQLEAQNINFQLDRQQQKDTASNIVAVLGKLADALGRIADKL* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3562 341 MobiDBLite consensus disorder prediction 241 278 - -
Aev06g3562 341 MobiDBLite consensus disorder prediction 1 36 - -
Aev06g3562 341 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 14 341 - -
Aev06g3562 341 Coils Coil 299 319 - -
Aev06g3562 341 Gene3D - 41 114 - -
Aev06g3562 341 ProSiteProfiles Myb-like domain profile. 33 109 IPR001005 -
Aev06g3562 341 Pfam Myb/SANT-like DNA-binding domain 40 132 IPR044822 -
Aev06g3562 341 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 14 341 - -
Aev06g3562 341 MobiDBLite consensus disorder prediction 241 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3562 Aev-Chr6 36459141 36462194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3562 16 117 Trihelix Transcription Factor Family AT1G76880 29.245 4.71e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aev06g3562 Myb_DNA-bind_4 4.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3562 - - gmx:100788594 454.907