Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3561 ATGCAATTCGCAAAGCTCGATGATTCTCCTATGTTCCGCAAGCAGATACAAGGCATGGAGGAGAGTGCTGAATCTTTGAGAGAGAGAAGTTTAAAATTTTACAAAGGATGTAGAAAATATACTGAAGGACTTGGGGAGGCATATGATGGAGACATTGCATTTGCAAGTGCGCTTGAAACTTTTGGTGGTGGGCATAATGACCCTATCAGCGTGGCTTTTGGAGGCCCTGTTATGACCAAATTCACTATAGCCTTAAGAGAAATTGGGACGTATAAAGAAGTCCTTCGATCACAGGTTGAGCATATGTTAAATGACAGATTGCTTCAATTTGTCAATATTGATTTGCAAGAGGTCAAGGAAGCACGGAAACGGTTTGACAAGGCTAGCCTTATTTATGACCAGACCCGTGAAAGGTTTCTGTCACTAAGAAAAGGCACAAAAAGTGATGTAGCAAATGCCTTAGAAGAGGAGCTTCATAATGCAAGATCTACATTTGAGCAAGCTCGGTTTAATCTGGTTACTGCCTTGTCAAATGTTGAAGCAAAGAAGAGATTTGAATTTTTGGAAGCTGTCAGCGGGACAATGGATGCACATCTTCGTTACTTCAAACAGGGCTATGAGTTGTTGCACCAGATGGAGCCATATATTAACCAGGTCTTGACTTATGCTCAGCAATCACGAGAAAGGTCCAATTATGAGCAGGCAGCTCTGAACGAAAGAATGCAAGAGTACAAACGGCAGATCGACCGAGAGAGTAGGTGGGCTTCAAATGGTTCCAATGGGTCTCCTAATGGAGATGGTATACAAGCCATTGGTAGAAGTTCACATAAGATGATAGAGGCAGTTATGCAATCTGCTGCCAAGGGAAAGGTCCAGACTATTCGACAAGGTTATCTCTCAAAGCGGTCATCAAACTTAAGGGGGGACTGGAAAAGGAGGTTTTTTGTTCTTGATAGTCGGGGAATGCTGTATTACTACCGTAAACAGATCAGCAAGTCATCAGGGTCAAGCAGCCAACATTCTGGTCAGAGGAATAGTTCTGAGCTTGGTTCTGGACTTTTAAGTCGATGGTTATCTTCTCATCATCATGGTGGAGTACATGATGAGAAATCTGTTGCTCGTCATACTGTGAACCTGCTTACATCAACAATCAAAGTTGATGCTGACCAATCAGATTTGAGATTTTGCTTCCGGATCATTTCACCAACAAAGAACTACACTTTGCAGGCAGAGAGTGCATTGGACCAAATGGATTGGATTGAAAAGATCACGGGTGTTATTGCCTCATTGCTGAGTTCTCAAATACCTGAAAGGTTGTTGCTTGCAAGTCCAATGGGAAGTGGTCACAATAGGTCTACCAGTGAGAGTAGTTCTTTTGGAAGTTCAGATTTCGATCACGTTGCTCTTGAAGAAGCAGAGAGAAATCTTGCCACTTCACATCTGGAGCGCCCCTCAAGAAGTTTACAGCAGCAGCGGTCTTGTACTAAAAGTGAGAAGCCAATTGATGTGTTGCGAAAAGTGTGTGGGAATGACAGGTGTGCTGATTGTGGCGCCCCTGAACCTGATTGGGCATCATTAAATCTTGGTGTTCTTGTTTGCATCGAGTGTTCCGGTGTTCATCGAAACCTTGGTGTACACATATCAAAGGTCAGGTCACTTACATTAGATGTTAAAGTGTGGGAATCTTCTGTGATAAGTTTGTTTCAGTCTCTTGGGAATACTTTTGCCAACTCTGTCTGGGAGGAACTTCTGCAATCGAGAAGTGCCTTTCAGGTTGACCTTGTGCCTACAGGGTTAAACAGGACTGATAAATCACTGGCAATTTTCGTCAGCAAACCTGGTCAATCTGATTCTCTATCTGTTAAGGAAAAGTTCATCCATGCAAAGTATGCTGAGAAGCTTTTTGTTCGCAAGCCAAAGGACAACCAATACCAGCTCTTGGTGACACAACAGGTCTGGGAGGCCGTACGCGCTAATGACAAAAAAGCTTTGTACCGTTACATTGTCAATTCTGACATTGATGTCAATGCTGCTTACGAGCAAATGTGCAGCAGCTCCTTAACCCTTGCTAAAGTAATGCTATTACAAGAGCAGACAAACCATGATCTTGGCTCTATATCAGGGAACTCATTGGACTGGTCCTCCACTAGCTCTTTGAACTTGGGAGGTACTAAAGAGGGACATGCCATGGACAATCTAGATGGGTCCACCCTACTTCACCTTGCTTGTGAAACTGCAGATATCGGCATGCTGGAGCTCCTCCTACAGTACGGTGCGAATGTAAATGCAACTGATTCGAGAGGTCAAACACCTCTACATCGCTGTATTCTCAAAGGCCGATCTACATTTGCAAGATTACTGCTTTCAAGGGGAGCCGATCCTCAAGCTGTGGATGATGAGGGAAGAACCCCTATTGAGCTAGCTGCAGAGTCGAATGCCGATGACAGACAAGTCCATGCTCCATCCACTGATTCTAATGGATGA 2484 0.4388 MQFAKLDDSPMFRKQIQGMEESAESLRERSLKFYKGCRKYTEGLGEAYDGDIAFASALETFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQFVNIDLQEVKEARKRFDKASLIYDQTRERFLSLRKGTKSDVANALEEELHNARSTFEQARFNLVTALSNVEAKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEQAALNERMQEYKRQIDRESRWASNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQISKSSGSSSQHSGQRNSSELGSGLLSRWLSSHHHGGVHDEKSVARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQIPERLLLASPMGSGHNRSTSESSSFGSSDFDHVALEEAERNLATSHLERPSRSLQQQRSCTKSEKPIDVLRKVCGNDRCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWESSVISLFQSLGNTFANSVWEELLQSRSAFQVDLVPTGLNRTDKSLAIFVSKPGQSDSLSVKEKFIHAKYAEKLFVRKPKDNQYQLLVTQQVWEAVRANDKKALYRYIVNSDIDVNAAYEQMCSSSLTLAKVMLLQEQTNHDLGSISGNSLDWSSTSSLNLGGTKEGHAMDNLDGSTLLHLACETADIGMLELLLQYGANVNATDSRGQTPLHRCILKGRSTFARLLLSRGADPQAVDDEGRTPIELAAESNADDRQVHAPSTDSNG* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3561 827 PANTHER CENTAURIN/ARF 1 820 IPR045258 GO:0005096
Aev06g3561 827 SUPERFAMILY Ankyrin repeat 664 813 IPR036770 -
Aev06g3561 827 MobiDBLite consensus disorder prediction 793 827 - -
Aev06g3561 827 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD1 1 820 - -
Aev06g3561 827 SMART ANK_2a 734 763 IPR002110 GO:0005515
Aev06g3561 827 SMART ANK_2a 767 796 IPR002110 GO:0005515
Aev06g3561 827 Gene3D - 643 816 IPR036770 -
Aev06g3561 827 Gene3D Arfaptin homology (AH) domain/BAR domain 4 251 IPR027267 -
Aev06g3561 827 Pfam BAR domain of APPL family 6 232 - -
Aev06g3561 827 Pfam Putative GTPase activating protein for Arf 501 638 IPR001164 GO:0005096
Aev06g3561 827 Pfam Ankyrin repeats (many copies) 754 808 IPR002110 GO:0005515
Aev06g3561 827 Coils Coil 151 171 - -
Aev06g3561 827 ProSiteProfiles Ankyrin repeat profile. 767 799 IPR002110 GO:0005515
Aev06g3561 827 MobiDBLite consensus disorder prediction 248 270 - -
Aev06g3561 827 CDD PH_ACAP 295 432 - -
Aev06g3561 827 SUPERFAMILY ArfGap/RecO-like zinc finger 498 638 IPR037278 -
Aev06g3561 827 CDD ArfGap 501 630 - -
Aev06g3561 827 SUPERFAMILY BAR/IMD domain-like 6 315 IPR027267 -
Aev06g3561 827 ProSiteProfiles PH domain profile. 292 428 IPR001849 -
Aev06g3561 827 SMART arf_gap_3 498 643 IPR001164 GO:0005096
Aev06g3561 827 ProSiteProfiles ARF GTPase-activating proteins domain profile. 498 643 IPR001164 GO:0005096
Aev06g3561 827 Gene3D Arf GTPase activating protein 479 642 IPR038508 -
Aev06g3561 827 MobiDBLite consensus disorder prediction 253 269 - -
Aev06g3561 827 ProSiteProfiles Ankyrin repeat profile. 734 766 IPR002110 GO:0005515
Aev06g3561 827 SMART PH_update 293 430 IPR001849 -
Aev06g3561 827 Coils Coil 227 247 - -
Aev06g3561 827 SUPERFAMILY PH domain-like 293 444 - -
Aev06g3561 827 ProSiteProfiles Ankyrin repeat region circular profile. 767 799 - -
Aev06g3561 827 SMART 5bar 11 218 IPR004148 GO:0005515|GO:0005737
Aev06g3561 827 CDD BAR_SFC_plant 14 215 IPR035670 -
Aev06g3561 827 ProSiteProfiles Ankyrin repeat region circular profile. 734 765 - -
Aev06g3561 827 PRINTS HIV Rev interacting protein signature 552 573 IPR001164 GO:0005096
Aev06g3561 827 PRINTS HIV Rev interacting protein signature 510 529 IPR001164 GO:0005096
Aev06g3561 827 PRINTS HIV Rev interacting protein signature 529 546 IPR001164 GO:0005096
Aev06g3561 827 Pfam PH domain 294 427 IPR001849 -
Aev06g3561 827 Gene3D - 285 437 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3561 Aev-Chr6 36447648 36454819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3561 510 637 C2H2 Transcription Factor Family AT4G21160 42.636 6.05e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3561 K12489 - gmx:100789134 1442.94