LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev06g3559	ATGTCTTCTACACTATGCAGCTCCATTGCAATGTGTCTAGCAGTATTACTCTTACTTCTTCACCTTGGATTTTCACATTCACACCCTCTTAGGATTACTCAGTTACCAGGTCAACCCCATGTTGAGTTTCATCAGTTTTCTGGTTATGTGACCCTTTTTGATCAGAAAAAATCACTCTTTTTCTACTTTGTTGAAGCTGAGAAAGATGCAGCTTCCAAACCCCTTGTTCTTTGGCTCAATGGAGGGCCTGGTTGCTCTTCTCTTGGGGTTGGTGCATTTTCAGAGAATGGACCATTTAGGCCTAAAGGAGAGGCCTTGGTTAGGAACCAATTCAGCTGGAACAGAGAAGCAAATATTTTGTACTTGGAAACACCAATCGGTGTTGGATTCTCTTATTCAAATGACACTTCCTCTTATGAGGGTGTCAATGACAAGATTACAGGCAAAGATAACTTGGTTTTCTTGCAAAACTGGTTTGTAAAGTTCCCAGAATACAGAAACAGAAGTTTGTTCATAGTTGGAGAAAGCTATGCTGGCCATTATGTTCCTCAACTTGCTGAGCTCATGCTTCAATTCAACAAAAAGAAGTTGTTCAATTTAAAAGGCATTGCTCTTGGTAACCCAGTTCTAGAGTTTGCAACAGATTTCAATTCTAGAGCAGAGTTTTTCTGGTCTCATGGACTAATTTCTGACATAACATACCAAATGTTCACTTCTGTTTGCAATTATTCAAGATATGTGAGGGAATATTATACTGGTGCTGTTTCACCTCTGTGTTCAAGGGTAATGAGCCAAGTTAGTACTGAAACTAGTAGGTTTGTTGACAAGTATGATGTGACCCTTGATGTTTGTATCTCTTCAGTCTTTTCACAAACCAAAGTCCTCAATCCACAGCAAGTTACTGAAACCATAGATGTGTGTGTGGAAGATGAAACAGTCAATTATTTGAACAGAAAAGATGTGCAATCTGCTTTACATGCACATCTGGTTGGAGTTCATAGATGGTCTGCTTGCAGCAATGTACTGGATTACGAGCTGCGCGACTTGGAGATACCAACAATCACAGTCGTCGGCAAATTAGTTAAGGCCGGAATACCGGTATTGATTTACAGTGGTGATCAGGATTCAGTCATTCCATTGACTGGAAGTAGAACATTAGTACATAGATTGGCAAGAGAACTAAGGTTGAAGACCACTGTGCCATACAGAGTCTGGTTTGAGGGGCAACAGGTTGGTGGATGGACTCAAGTTTATGGAAACATACTTTCATTTGCAACAATTAGAGGAGCATCACATGAAGCTCCATTTTCACAGCCTGAGAGATCACTTGTTCTGTTCAAGTCTTTCTTAGAAGGTCGACCTCTACCACAAGAGTTCTGA	1380	0.4051	MSSTLCSSIAMCLAVLLLLLHLGFSHSHPLRITQLPGQPHVEFHQFSGYVTLFDQKKSLFFYFVEAEKDAASKPLVLWLNGGPGCSSLGVGAFSENGPFRPKGEALVRNQFSWNREANILYLETPIGVGFSYSNDTSSYEGVNDKITGKDNLVFLQNWFVKFPEYRNRSLFIVGESYAGHYVPQLAELMLQFNKKKLFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDITYQMFTSVCNYSRYVREYYTGAVSPLCSRVMSQVSTETSRFVDKYDVTLDVCISSVFSQTKVLNPQQVTETIDVCVEDETVNYLNRKDVQSALHAHLVGVHRWSACSNVLDYELRDLEIPTITVVGKLVKAGIPVLIYSGDQDSVIPLTGSRTLVHRLARELRLKTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKSFLEGRPLPQEF*	460

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev06g3559	459	Gene3D	-	307	343	-	-
	Aev06g3559	459	SUPERFAMILY	alpha/beta-Hydrolases	32	456	IPR029058	-
	Aev06g3559	459	ProSitePatterns	Serine carboxypeptidases, serine active site.	172	179	IPR018202	GO:0004185
	Aev06g3559	459	Gene3D	alpha/beta hydrolase	29	286	IPR029058	-
	Aev06g3559	459	ProSitePatterns	Serine carboxypeptidases, histidine active site.	422	439	IPR033124	GO:0004185
	Aev06g3559	459	PANTHER	CARBOXYPEPTIDASE	6	457	-	-
	Aev06g3559	459	PRINTS	Carboxypeptidase C serine protease (S10) family signature	122	132	IPR001563	GO:0004185\|GO:0006508
	Aev06g3559	459	PRINTS	Carboxypeptidase C serine protease (S10) family signature	422	435	IPR001563	GO:0004185\|GO:0006508
	Aev06g3559	459	PRINTS	Carboxypeptidase C serine protease (S10) family signature	109	121	IPR001563	GO:0004185\|GO:0006508
	Aev06g3559	459	PRINTS	Carboxypeptidase C serine protease (S10) family signature	158	183	IPR001563	GO:0004185\|GO:0006508
	Aev06g3559	459	Pfam	Serine carboxypeptidase	37	452	IPR001563	GO:0004185\|GO:0006508
	Aev06g3559	459	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	6	457	IPR001563	GO:0004185\|GO:0006508
	Aev06g3559	459	Gene3D	-	354	452	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev06g3559	Aev-Chr6	36433307	36436418	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev06g3559	315	455	Calmodulin-binding Proteins	AT2G22960	28.369	1.07e-14	70.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev06g3559	K16297		-	gmx:100805130	808.135