Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3556 ATGGTTAATTGGGCATCATCATCATCATTTGGTCCATTACTACCTCATTCCATGTCTATTATGCCTTCTCTTGTTTCTTCTCCACAACAATCTTGTTCTTCTTTAATAAGGCCTCTTCCTATAGGAGGCTCTTATTTTCCAACAACCCCTTTTCATCTTCATCATCACTTAATTCCTCCTCCTTCTTCATCTACTTCCGGTGATCAATTTGATGTGGCTGGACCAAGCTCATCATCATCTCACCATCATCATCATCTCATCACCAATAATAATGTTAGAGTTGTTGATCCTCCTACAAGACCCCATTCCGGAATCTGGTTCATGCTTCAAGCTTCTCAAAATCAGGCGAAAGAACCATTCTTGCCCCAAATAGCAAAGAGCTACCTAAGAATCAAAGATGGAAGGATGACAGTTCGGTTGCTATTGAAGTATCTTGTTAGCAAACTCAGACTCCACAGCGAATCAGAGATAGAGATAAGATGCAGAGGGCAACAACTTTTACCTTTCTTAACGTTGCAGCATGTGAGAGATAACATTTGGAGTCATAGGGACACTACCAACAACGTTAACAACACATCATCCTCAACAAGGACTTTGCTTTCTGATTCCTCAACCACAGATCATGTCATGGTGCTACATTACGGTAGAAGTACCACTTAA 660 0.4076 MVNWASSSSFGPLLPHSMSIMPSLVSSPQQSCSSLIRPLPIGGSYFPTTPFHLHHHLIPPPSSSTSGDQFDVAGPSSSSSHHHHHLITNNNVRVVDPPTRPHSGIWFMLQASQNQAKEPFLPQIAKSYLRIKDGRMTVRLLLKYLVSKLRLHSESEIEIRCRGQQLLPFLTLQHVRDNIWSHRDTTNNVNNTSSSTRTLLSDSSTTDHVMVLHYGRSTT* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3556 219 PANTHER RING FINGER PROTEIN 3 217 - -
Aev06g3556 219 Gene3D - 78 188 - -
Aev06g3556 219 PANTHER RING FINGER PROTEIN 3 217 IPR044171 GO:0007275
Aev06g3556 219 MobiDBLite consensus disorder prediction 62 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3556 Aev-Chr6 36393142 36404073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3556 118 177 C3H Transcription Factor Family AT3G23060 43.333 3.83e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3556 - - gmx:102664769 230.72