Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3550 ATGACGCAGGCTGTGGAGGTTCTCAATAGGTATGGGACGGATCTGGTAGGGGAAGCTAGAAGTTCTGATTCTGAGTGTTTGACAGGTTTTGAGTGTTTCTTGAACATTGTGAGGGCTCTGGGGATGGGATCGTGCATCTCAGAGGCCGGTGGTCGCTCCCCTCCCCTGCTTCCTTATGAGCCTGACTCCAATTTGGATGGTGGGAAGAGGAGGCGGCTGAAGGGTTCCACTTCCTTCGATTACAAAGTGCCTGGGAGGATGTTCATGAATGGGTCCAGCGAGGTTGCCTCCTTGTACTGCAAGCAAGGTAGAAAGGGTATCAACCAAGACGCCATGCTTGTTTGGGAGAACTTTTGTTCAAAGGAGGGCACCATCTTTTGTGGTGTATTTGATGGTCATGGACCTTATGGCCATAGGGTTGCAAAGAGAGTTAGGGATTCTTTTCCTGTAAAGCTTAGTGCTCAATGGGATTTGCACCATAAGAATAGAGATGGCGTGAGTGATCAAAGCAGTGCTGCTGGAAGTTACAATTCTGAGGAGATTGGATTCAAACTGGTTGATGAGAAACCTAGTGTGACTGATCATGAGCTTGATGGAACAGATACAATTTTGACACTAAAAGAATCTTATCTGAAGGCTTGTAAGATTATGGACAAAGAACTGAAATTGCATCCTGATATTGATTGTTTTTGCAGTGGGACTACAGCAGTTACCTTGGTCAAGCAGGGGCAAGACCTTGTTATTGGTAATGTTGGGGACTCTAGAGCTGTGTTGGGTACACGAGATCATGATGATTCTCTTGTTGCTGTTCAATTGACAATTGACCTTAAGCCAAATCTTCCAAGAGAAGAAGAGAGAATTAAGCTTCGTAAGGGAAGGGTCTTTTCCCTTCACAATGAGCCAGATGTTGCTCGAGTTTGGTTGCCTAACTCTGATTTCCCTGGTCTTGCTATGGCACGGGCTTTTGGAGATTTTTGCCTTAAAGACTATGGATTGATTTCTGTTCCAGATGTCTCATACCACCGCCTAACTGAGCAGGATGAATTTGTTGTATTAGCAACAGATGGGATCTGGGATGTTCTATCGAACGAAGAAGTTGTGGACATTGTTGCATCTGCTCCACGCTCTTCTGCAGCTCGATCGCTAGTTGAGTCAGCCGTTAAAGCATGGAGGACGAAATTCCCTTTTTGCAAGGTTGATGATTGTGCTGCGGTTTGCCTCTTCTTTGATTTGAATTCAGATGAAAGTTCAGCATCTACTACAGACGAGCCGGTACCAGAGTCGTCAATTAACCAAACTGAGCAGTCATCTCTGCTTGGTGAGAAGGGAGCTGGAGTGGAAGCTGAAAAACAGCAGCAGCAATAG 1365 0.4571 MTQAVEVLNRYGTDLVGEARSSDSECLTGFECFLNIVRALGMGSCISEAGGRSPPLLPYEPDSNLDGGKRRRLKGSTSFDYKVPGRMFMNGSSEVASLYCKQGRKGINQDAMLVWENFCSKEGTIFCGVFDGHGPYGHRVAKRVRDSFPVKLSAQWDLHHKNRDGVSDQSSAAGSYNSEEIGFKLVDEKPSVTDHELDGTDTILTLKESYLKACKIMDKELKLHPDIDCFCSGTTAVTLVKQGQDLVIGNVGDSRAVLGTRDHDDSLVAVQLTIDLKPNLPREEERIKLRKGRVFSLHNEPDVARVWLPNSDFPGLAMARAFGDFCLKDYGLISVPDVSYHRLTEQDEFVVLATDGIWDVLSNEEVVDIVASAPRSSAARSLVESAVKAWRTKFPFCKVDDCAAVCLFFDLNSDESSASTTDEPVPESSINQTEQSSLLGEKGAGVEAEKQQQQ* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3550 454 CDD PP2Cc 95 409 IPR001932 -
Aev06g3550 454 Pfam Protein phosphatase 2C 186 386 IPR001932 -
Aev06g3550 454 Gene3D - 90 411 IPR036457 -
Aev06g3550 454 PANTHER ALPHABET, ISOFORM E-RELATED 42 416 - -
Aev06g3550 454 MobiDBLite consensus disorder prediction 414 454 - -
Aev06g3550 454 ProSiteProfiles PPM-type phosphatase domain profile. 95 409 IPR001932 -
Aev06g3550 454 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 42 416 - -
Aev06g3550 454 MobiDBLite consensus disorder prediction 414 439 - -
Aev06g3550 454 SUPERFAMILY PP2C-like 87 410 IPR036457 -
Aev06g3550 454 SMART PP2C_4 89 407 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3550 Aev-Chr6 36333872 36337283 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3550 68 449 PP2C-type Phosphatase Gene Family AT1G16220 57.215 8.09e-151 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3550 - - gmx:100802479 795.808