Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3543 ATGACAGATGATGGTGGTGGAGGAGCTTCATCCAAGTCGTCATATTCTTCCATATATGATGTTTTCCTGAGTTTCAAAGGCGAAATAAGGCACTCATTCACCGATCATCTTTATCACGCTCTGACCAAAAACGGAATCAACACATTCAGAGACACAGAGAAACTCAGAGTTGGAGAAGAAATTAGACCTTCTCTCCTCGATGCGATTCAACGATCAAGGATGTCGATTCCTGTGCTGAGTCAAAACTACGCGTTTTCCTCGTGGTGCCTCGACGAACTGGTGAAGATCATGGAGTGCTCGGAAAATGGGAGAAACCGACCGGTTTTGCCAGTGTTTTACCATGTGGTGCCATCAGATCTGCGACATCAGAAAAATCAATTTGGAAGAGCAATGGCGAAACATGAAGACAGATATGGCAAAGACTCGAAGAGGGTTCAAGCATGGAGGTCTGCTCTATTTGCAGTATGCGAGCTTAGCGGAGTTGATTGCAACGGCAGGTCTGAAAATGATATCATCAAAAAGATTGTTGGAGAGGTATTAAAAAAACTTCCCCGTGAACCTCTACACATTAAACACCAAGTTGAGCTTGATTCCCGATTTGAAGATCTAAAATCTCTTTTAGATATTGAATCTCGTGACACTCTTTGCATGTTATGTATTTATGGAGATGGTGAAACAAACAAAACAATGTTTGTGGGGGCACTCTATAACAAGATCAGTGATGGATTTGATGCTGCATGTTTTCTTGATAAGGTTAGTGAAAAATCAAAGGAAAGCATCAATGGCCTAGAAGGACTCCAGAAGACACTTCTTTGTGAAATGGGTCATCATGTGCCAAATGCTGCATTGGGCAGCACATTCAGAGGATGCTCAGAAATTAAACGGATGTTGGGTCATAAAAGGGTTCTTTTGATATTGGATGATGTTGATAGTGTAGAACAGTTGGAATCATTGGCAGGAGGAGCTGATTGGTTTGGTCCTGGTAGCAGGATCATTGTAACCACAAGAGATGAATATTTGCTGGATAAACATGTTCTGGATGGTGTTGACATTAAGAGATATTGCATTGATGAATGTGATCTTGAAGCCATGAAAGCTACTGAATCAAATAAAAAACGAAAGAGGGGTGTGGAGGAGGAAGGAGATGTGGTTGGCTTTGATGATAGCTTGAGGATTGTAATCAACCAGCTCAAGGAAGAGGACCCATTTCATAATGTTGTTTCCATAACTGGCATGGGTGGTTTAGGCAAGACTACTCTTGCAAGAAAGATTTATGAAAACAATGAGGTCAAAAACTTGTTCCCTTGTCGTGCAATGTGTTCTATTTCCAAAGATTTCAATGAAAGGAAAGTTTTCTTGGACCTTCTCAATTGCTTGAAGTCATCCACTTCTAGATTTGAAGATTTAAGAGAAGAGAAGTTGAAAGAGGAGGTGAGGAAATGTTTGATCAGGAACAAGTATTTGGTGGTGCTTGATGATATATGGGAACCTGAAGTATGGGACAAAGTGAAATATGTCTTTCCAAATAACCACAAAGGTAGCATGATATTGATAACAAGTCGCAATGATCAGGTGGCAAACTACTCAGGATCAAGGAGTCCTCACCACAAACTTCTCCCACTAAATGCAGAAAAAAGCTGGGAATTATTCTGCATGAAGGTGTTTGGTGGAGAAGAGTGCCCTTCTAATTTAGAGCCTATTGGTAAATCAATTGTTGAAAAGTGTGGTGGTTTACCATTGGCTATTATTACCATAGCAGGGCTTATTGCAAGGAAGGAGAGGTCTTGTATTGAGTGGTCAAGAATTGAGGGTTATGTCCATTGGCATCTTGCTGAGGATAGTACAAAAGTGATGGATGTTTTGAAGGTGAGCTACAACAGTTTGCCTCAAGTATTGAAACCATGCTTTCTATATTTTGGGATCTATCCAGAAGACTATGAGATATGTGCAAGGGAACTGATTCAGCTATGGATGGCTGAGGGGCTTATCCAACCGAAAAGAACTAGAACATCAAAGGTACCAAGACCAGAAGATGTTGGTGAAGATTACTTGAATCAGCTGGTGGATCGGAATTTGGTGCAAGTTGTAAAGAGGAGGACTATTGATGGCGGTGTGAAGAAATGCCGTTTCCACGATCTCCTCCGCGAGCTTTGCATATTAGAGAGCGGAATCAATAACTTATTGGAGATTTGTACAGAGTCCTCAAGCGATTCCCTTAGCAATTATAGCAGATTGTCCTTTCTGTGTGATGCTAAATACTCTGCCTCTTTAATCAAGGGGAATATGTCTTCCACTCGCTCCTTGTTCTTCTTTGCTAGAAAGAGCTATTCAGCAGAAGATATTATGAAAAACTTCCCAATGCTTTATGTACTACATGTGGAACCTTATGTAGGATTTAAGGAAATTCCTTATGATTTGAAGATGATCCACTTGAAGTACTTGAGAGTAAAAGCATACAACTCTACAAGAGACAATATTCCAGATTGGATATGGAGCCTTGATAATTTAGAAACACTGGATTTAAGGGGTTGGATCCCATCCAAGAGAAGCATTAGCATTTGGAAGCTAGAACGACTAAGACATTTTTATACATCATATTCTGTGATGCTAGAAATGGATGAGGAAGGAGCAAATAGCAAGCCAATTATGTGGAATCTCCAAACTCTCACGAATGTGGTTGTTGAGCCGAAAACAATGCTCCTGATCAACACTGACCGTTTTCCAAATTTGGTAAAATTGAGTTTAATATTTAATTACATTCGTATCAGGCCACAACCACAACATAAACCGAAGTTGTTGGAGCTGCACAACCTAAGCAATCTTCGAACACTGAAAATAGACTTATGTCGTTTAAGTGTTTCATTTGATAAAATTGAATTTCCTCCTAATGTTTCCAAGATCACCTTGGAGCGAATTGATAAAGTGGATGACAGTGGTTACATGAGTGTTCTAGGACAGATTCCGCGCCTTCGGGTTCTGAAATTGAAAGGAGAATGGACAAACGGAGATACTCTTAATTGTGGTGTTGCAGGGGATTTCCCACAACTTGAAGTGTTTCATATGACAAATTTCCATTTCCTTAGAAGGATTACAATAGAGGATGGTGCAATGCCTCTTCTTCAACACATGCTTATCTCTCGTTGCTTTAAATTGAAGGACATTCCTGAACGGTTGTTGCACTTGTGTGAGATCAAATAA 3198 0.4021 MTDDGGGGASSKSSYSSIYDVFLSFKGEIRHSFTDHLYHALTKNGINTFRDTEKLRVGEEIRPSLLDAIQRSRMSIPVLSQNYAFSSWCLDELVKIMECSENGRNRPVLPVFYHVVPSDLRHQKNQFGRAMAKHEDRYGKDSKRVQAWRSALFAVCELSGVDCNGRSENDIIKKIVGEVLKKLPREPLHIKHQVELDSRFEDLKSLLDIESRDTLCMLCIYGDGETNKTMFVGALYNKISDGFDAACFLDKVSEKSKESINGLEGLQKTLLCEMGHHVPNAALGSTFRGCSEIKRMLGHKRVLLILDDVDSVEQLESLAGGADWFGPGSRIIVTTRDEYLLDKHVLDGVDIKRYCIDECDLEAMKATESNKKRKRGVEEEGDVVGFDDSLRIVINQLKEEDPFHNVVSITGMGGLGKTTLARKIYENNEVKNLFPCRAMCSISKDFNERKVFLDLLNCLKSSTSRFEDLREEKLKEEVRKCLIRNKYLVVLDDIWEPEVWDKVKYVFPNNHKGSMILITSRNDQVANYSGSRSPHHKLLPLNAEKSWELFCMKVFGGEECPSNLEPIGKSIVEKCGGLPLAIITIAGLIARKERSCIEWSRIEGYVHWHLAEDSTKVMDVLKVSYNSLPQVLKPCFLYFGIYPEDYEICARELIQLWMAEGLIQPKRTRTSKVPRPEDVGEDYLNQLVDRNLVQVVKRRTIDGGVKKCRFHDLLRELCILESGINNLLEICTESSSDSLSNYSRLSFLCDAKYSASLIKGNMSSTRSLFFFARKSYSAEDIMKNFPMLYVLHVEPYVGFKEIPYDLKMIHLKYLRVKAYNSTRDNIPDWIWSLDNLETLDLRGWIPSKRSISIWKLERLRHFYTSYSVMLEMDEEGANSKPIMWNLQTLTNVVVEPKTMLLINTDRFPNLVKLSLIFNYIRIRPQPQHKPKLLELHNLSNLRTLKIDLCRLSVSFDKIEFPPNVSKITLERIDKVDDSGYMSVLGQIPRLRVLKLKGEWTNGDTLNCGVAGDFPQLEVFHMTNFHFLRRITIEDGAMPLLQHMLISRCFKLKDIPERLLHLCEIK* 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3543 1065 ProSiteProfiles TIR domain profile. 17 183 IPR000157 GO:0007165
Aev06g3543 1065 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 365 IPR027417 -
Aev06g3543 1065 Pfam TIR domain 19 189 IPR000157 GO:0007165
Aev06g3543 1065 PRINTS Disease resistance protein signature 481 495 - -
Aev06g3543 1065 PRINTS Disease resistance protein signature 406 421 - -
Aev06g3543 1065 PRINTS Disease resistance protein signature 936 952 - -
Aev06g3543 1065 PRINTS Disease resistance protein signature 575 589 - -
Aev06g3543 1065 Gene3D Ribonuclease Inhibitor 791 1065 IPR032675 -
Aev06g3543 1065 Pfam NB-ARC domain 204 344 IPR002182 GO:0043531
Aev06g3543 1065 Pfam NB-ARC domain 388 626 IPR002182 GO:0043531
Aev06g3543 1065 SMART till_3 18 158 IPR000157 GO:0007165
Aev06g3543 1065 Gene3D - 540 629 IPR042197 -
Aev06g3543 1065 PANTHER DISEASE RESISTANCE RPP8-LIKE PROTEIN 3-RELATED 368 1058 - -
Aev06g3543 1065 SUPERFAMILY L domain-like 709 1063 - -
Aev06g3543 1065 Gene3D - 183 347 IPR027417 -
Aev06g3543 1065 Gene3D - 371 533 IPR027417 -
Aev06g3543 1065 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 160 IPR035897 -
Aev06g3543 1065 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 380 639 IPR027417 -
Aev06g3543 1065 Gene3D - 11 182 IPR035897 -
Aev06g3543 1065 Gene3D - 630 719 IPR036388 -
Aev06g3543 1065 PANTHER DISEASE RESISTANCE PROTEIN RP 368 1058 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3543 Aev-Chr6 36273746 36277606 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3543 7 337 WRKY Transcription Factor Family AT4G12020 26.426 7.32e-22 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3543 - - aip:107625624 954.896