Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3518 ATGATGGTTTCTAGGGGATTGTTCGGGTGGTCGCCGCCTCACGTGCAACCGCTGACGCCAGTATCGGAGGTGTCCGAGCCGCCGGAGTCGCCGTCGCCGTACCTCGACCCCGGCGCTGAGACCTCGACGTCGCAGCAGCAGCAGCAGATGGAACTCGAAGAGGAAATGGAGGAGCCGGAGGAGATGGAGCCGCCGCCCGCGGCGGTTCCATTCTCGCGGCTCTTTGCGTGCGCCGACCGGTTCGACTGGTTCCTCATGGCGGCTGGTTCGGTCGCAGCTGCGGCTCACGGCGCCGCCCTCGTCGTGTACCTGCACTACTTCGCGAAGATCATCCACGTGCTGCGGATGGATCCTCGGCAACAGCAGGATCAGTTTGACAGGTTCACCGAGCTTGCTTTAACCATTGTTTATATTGCTGCGGGAGTTTTTGCAGCTGGTTGGATTGAGGTTTCTTGCTGGATTTTGACCGGAGAACGGCAGACGGCTGTCATCAGGTCAAAATATGTTCAAGTGTTGCTAAACCAAGATATGAGTTTTTTTGATACTTATGGGAATAATGGAGACATTGTGAGTCAAGTATTGAGTGATGTGCTGCTTATTCAGTCTGCCCTTAGTGAAAAAGTTGGAAATTACATTCATAACATGGCTACATTCTTCACTGGTCTTGTCATTGGACTCATAAATTGTTGGCAGATTGCTTTGATAACATTAGCCACAGGTCCATTTATTGTTGCTGCTGGAGGAATATCAAATATATTCCTCCACAGGCTTGCAGAAAATATTCAAGATGCATATGCTGAAGCAGCTAGCATTGCTGAACAGGCAGTTTCCTATATAAGGACATTGTATGCATTTACAAATGAAACATTGGCCAAGTATTCCTATGCAACATCACTGCAAGCTACTCTTAGATATGGTATTTTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACATATGGACTTGCAATATGTTCTTGTGCATTGCAACTCTGGGTTGGAAGGTTCTTGGTTATGCATGGAAAAGCACATGGTGGTGAAATTGTAACAGCTCTTTTTGCTGTAATTCTAAGCGGCCTGGGACTGAATCAAGCAGCAACAAATTTCTACTCATTTGATCAAGGGCGAATAGCTGCTTATAGATTGTTTGAGATGATTAGCCGGTCATCCTCGTCTGATGATCATGATGGCACTACTCCTGATTCTGTGCAAGGAAATATAGAGTTTCGGAATGTCTATTTCAGCTATCTGTCTCGTCCTGAAATCCCTATCTTGAGTGGATTTTACCTCAGTGTACCTGCTAAGAAAGCAGTGGCTCTTGTTGGAAGAAATGGCTCTGGGAAGAGTAGTATTATTCCACTCATGGAGCGTTTCTACGATCCTACATTAGGGGAAGTTCTTCTGGATGGAGAAAACATCAAGAATTTGAAACTTGAATGGCTAAGGAGCCAAATAGGACTAGTCACCCAGGAGCCTGCTTTGCTCAGCTTGAGTATAAGAGACAACATTGCTTATGGGAGGGATGCCACCATGGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCACATACATTTATCAGCTCATTGCCTAGAGGTTATGACACACAGGTTGGCAGGGCTGGTCTGGCTTTGACTGAAGAACAAAAAATAAAACTTTCTATTGCTAGAGCAGTGTTGTTAAATCCATCAATTCTTCTACTTGACGAGGTTACTGGAGGACTTGATTTTGAGGCTGAGAGGGCTGTTCAGGAGGCTCTTGATCTTCTTATGTTGGGACGCTCAACGATAATAATTGCTCGAAGGCTTAGTCTCATAAGGAATGCTGATTATATAGCTGTTATGGAAGAAGGTCAACTTGTTGAGATGGGTACTCATGATGAATTATTGACCCTGGATGGCTTGTATGCAGAGCTCCTTCGGTGCGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAAATTACAAGGAGACTGCAGCTTTCCAAATTGAGAAGGATTCTTCAGCAAATCAGAGCTTCAAAGAACCAGCATCCCCTAAGATGATGAAGTCACCATCTCTTCAAAGAAGATCAAATGTATCCCGGCCTACAGATGGCAACTTTAACTTTCAAGAATCACCAAAAATCCGGAGTCCACCACCTGAGAAGATGCTGGAAAATGGTCAAGCTTTTGATGCTGCAGATAAGGAGCCATCAATAAAAAGGCAGGATAGTTTTGAAATGAGACTGCCCGAGTTGCCCAAGATTGATGTTCAGTCTGTGCATCGACAAAAATCAAATGGTTCTGATCCAGAATCCCCTGTTTCTCCCCTTTTAACATCTGATCCCAAGAGCGAACGCTCCCATTCACAGACTTTTAGTAGACCACAGAGTCATTCTGATGATGTTTCAGTTGAAATGAGAGAGTCAAAAGATTCACGGCATCGAAAGCCACCATCACTTCGGAAGCTGGCTGAGCTTAGTTTTGCTGAGTGGCTCTATGCTGTGTTAGGCAGCATAGGTGCTGCTACCTTTGGTTCTTTCAATCCTCTTCTTGCTTATGTTATTGGCCTTGTGGTGACAGCTTACTACAGGATTGATGAAGATAATCATTTACGATGGGAGGTTAACAAGTGGTGCTTGACAATTGGTTGCATGGGTATTGTGACAGTCATTGCCAACTTTTTGCAGCATTTTTACTTTGGTATTATGGGAGAGAAAATGACAGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAGTAGGATGGTTTGATGATGAGGAAAACAGCGCTGACAATTTGTCCATGCGATTAGCCAATGATGCTACTTTTGTACGAGCTGCCTTTAGCAACCGACTTTCTATATTTATTCAGGACAGTGCTGCAGTAATTGTTGGTCTTCTCATTGGTGCCTTGCTGCACTGGCGGTTAGCACTTGTGGCTCTTGCTACCCTTCCAATTCTATGTGTTGCTGCTATTGCCCAGAAAATGTGGCTAGCTGGATTTTCAAGGGGCATACAGGAAATGCACAGAAAGGCATCTTTGGTTCTTGAAGATGCTGTTAGAAACATTTACACTGTTGTTGCATTTTGTGCGGGTAATAAGGTAATGGAGCTCTATAGGCTGCAGTTGAAGAAAATATTTACGCAGAGCTTTCTTCATGGAATGGCAATTGGTTTTGCATTTGGCTTTTCTCAGTTTCTACTTTTTGCTTGTAATGCCCTTCTACTCTGGTACACTGCAATATGCATAAAAAAAGGTTATATCAGTCCACCTACCGCGCTCAAGGAGTATATGGTTTTCTCATTTGCAACATTTGCACTTGTGGAGCCTTTTGGGTTGGCCCCTTACATCCTTAAAAGGCGGAAGTCTCTCATATCAGTATTTGAAATTATAGATCGGGTGCCTAAAATTGATCCTGACGAAAGCTCAGCATTGAAGCCACCTAATGTACACGGAAGAATCGAGTTAAAGAATGTCGATTTTTGTTACCCAACTCGTCCAGAAGTGTTGGTATTGAGTAATTTTACTCTCAAAGTCAATGGGGGGCAAACCGTCGCTGTTGTGGGAGTTTCAGGGTCAGGAAAGAGCACTATCATAAATTTGATTGAGAGGTTTTATGATCCAGTTGCTGGACAAGTTTTGCTTGATGGGAGGGATTTAAAGCTGTACAACTTGAGATGGCTGAGGAGCCACCTTGGTCTGGTTCAACAGGAACCTATTATCTTCTCGACAACCATAAGGGAAAACATCATATATGCGAGGCATAATGCCAGCGAAGCTGAGATGAAAGAGGCCGCAAGGATAGCAAATGCTCATCATTTCATTAGCAGCTTGCCTCATGGCTATGACACTCATGTTGGGATGAGAGGTGTTGACTTAACCCCGGGACAAAAACAGAGGATTGCAATTGCGAGGGTGGTGCTGAAAAATGCACCTATTTTGTTGTTGGATGAAGCGAGTTCATCGATTGAATCTGAGTCGAGCCGAGTGATACAAGAGGCTCTGGACACACTGATAATGGGAAACAAGACTACTATTTTAATAGCACATAGGGCTGCAATGATGAGGCACGTGGACAATATCGTAGTGCTCAATGGAGGACGGATAGTGGAGGAAGGGAGTCATGACTCATTGATGGCTAAGAATGGTCTGTACGTCAGATTGATGCAACCTCATTTCGGTAAGGCTCTGCGTCAGCACCGGCTTGTTTGA 4215 0.4458 MMVSRGLFGWSPPHVQPLTPVSEVSEPPESPSPYLDPGAETSTSQQQQQMELEEEMEEPEEMEPPPAAVPFSRLFACADRFDWFLMAAGSVAAAAHGAALVVYLHYFAKIIHVLRMDPRQQQDQFDRFTELALTIVYIAAGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFTGLVIGLINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVMHGKAHGGEIVTALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSDDHDGTTPDSVQGNIEFRNVYFSYLSRPEIPILSGFYLSVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHTFISSLPRGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLRCEEAAKLPKRMPVRNYKETAAFQIEKDSSANQSFKEPASPKMMKSPSLQRRSNVSRPTDGNFNFQESPKIRSPPPEKMLENGQAFDAADKEPSIKRQDSFEMRLPELPKIDVQSVHRQKSNGSDPESPVSPLLTSDPKSERSHSQTFSRPQSHSDDVSVEMRESKDSRHRKPPSLRKLAELSFAEWLYAVLGSIGAATFGSFNPLLAYVIGLVVTAYYRIDEDNHLRWEVNKWCLTIGCMGIVTVIANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDDEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVGLLIGALLHWRLALVALATLPILCVAAIAQKMWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFTQSFLHGMAIGFAFGFSQFLLFACNALLLWYTAICIKKGYISPPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDESSALKPPNVHGRIELKNVDFCYPTRPEVLVLSNFTLKVNGGQTVAVVGVSGSGKSTIINLIERFYDPVAGQVLLDGRDLKLYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVIQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGSHDSLMAKNGLYVRLMQPHFGKALRQHRLV* 1405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3518 1404 Pfam ABC transporter transmembrane region 842 1101 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev06g3518 1404 Pfam ABC transporter transmembrane region 90 358 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev06g3518 1404 Gene3D ABC transporter type 1, transmembrane domain 73 660 IPR036640 GO:0005524|GO:0016021
Aev06g3518 1404 SUPERFAMILY ABC transporter transmembrane region 814 1140 IPR036640 GO:0005524|GO:0016021
Aev06g3518 1404 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 832 1124 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev06g3518 1404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1145 1391 IPR027417 -
Aev06g3518 1404 MobiDBLite consensus disorder prediction 687 710 - -
Aev06g3518 1404 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 408 643 IPR003439 GO:0005524
Aev06g3518 1404 MobiDBLite consensus disorder prediction 669 734 - -
Aev06g3518 1404 SUPERFAMILY ABC transporter transmembrane region 73 388 IPR036640 GO:0005524|GO:0016021
Aev06g3518 1404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 397 642 IPR027417 -
Aev06g3518 1404 PANTHER ABC TRANSPORTER B FAMILY 19 1400 - -
Aev06g3518 1404 MobiDBLite consensus disorder prediction 797 813 - -
Aev06g3518 1404 Gene3D ABC transporter type 1, transmembrane domain 1002 1152 IPR036640 GO:0005524|GO:0016021
Aev06g3518 1404 Gene3D ABC transporter type 1, transmembrane domain 772 988 IPR036640 GO:0005524|GO:0016021
Aev06g3518 1404 Coils Coil 254 274 - -
Aev06g3518 1404 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1400 - -
Aev06g3518 1404 SMART AAA_5 1182 1369 IPR003593 -
Aev06g3518 1404 SMART AAA_5 435 614 IPR003593 -
Aev06g3518 1404 Pfam ABC transporter 1173 1321 IPR003439 GO:0005524
Aev06g3518 1404 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1155 1392 IPR003439 GO:0005524
Aev06g3518 1404 MobiDBLite consensus disorder prediction 1 65 - -
Aev06g3518 1404 MobiDBLite consensus disorder prediction 36 50 - -
Aev06g3518 1404 CDD ABC_6TM_Pgp_ABCB1_D1_like 123 383 - -
Aev06g3518 1404 Gene3D - 398 645 IPR027417 -
Aev06g3518 1404 Gene3D - 1153 1392 IPR027417 -
Aev06g3518 1404 MobiDBLite consensus disorder prediction 747 813 - -
Aev06g3518 1404 CDD ABC_6TM_Pgp_ABCB1_D2_like 827 1138 - -
Aev06g3518 1404 Pfam ABC transporter 429 573 IPR003439 GO:0005524
Aev06g3518 1404 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 87 375 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev06g3518 1404 MobiDBLite consensus disorder prediction 756 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3518 Aev-Chr6 36104334 36112617 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3518 56 698 Calmodulin-binding Proteins AT2G36910 44.290 2.18e-171 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3518 K05658 - gmx:100789116 2469.89