Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev06g3516 | ATGACGAATTACTTAATGTTACTCTCTAGAGGGGGTGATTTTGAGGCTACATACACAAGTGTCTCCCATGATAATTATTCCAACCGTGTGTTTGAGTGCAAGACATGTAATAGGCAATTCCCTTCATTTCAAGCACTTGGAGGCCATAGGGCTAGTCACAAGAAGCCAAGGTTGATGTTAGGAGATGATATTCATGGTGGAGAAAACAACAACAATAACAACATGATGGATTCTCAAGTATTGGTTTCTTCACCACAAAAGCCCAAAACTCATGAATGTTCAATTTGTGGGTTAGAATTTGCAATTGGGCAAGCCTTAGGTGGCCACATGAGGAGGCATAGAGCTGAGAATTTGAATGGTGGGAAGTTGAATAGCAAAAATAATAATTATACTACTATGAGTCATAGTAGTAGTAGTGGTGGTAATAATAGTAGTAGTGTTGATTCTTCATCAAAAAAGGGTGTGAAAGTTGCAAGGAACAAGAGGGTTTTGGTTTTGGATTTGAATTTGACACCATTTGAGAATGATTTGGAGTTTTTGAAGATTGGAAAGGCAACTACGTTGGTTGATTATTTGTGA | 579 | 0.38 | MTNYLMLLSRGGDFEATYTSVSHDNYSNRVFECKTCNRQFPSFQALGGHRASHKKPRLMLGDDIHGGENNNNNNMMDSQVLVSSPQKPKTHECSICGLEFAIGQALGGHMRRHRAENLNGGKLNSKNNNYTTMSHSSSSGGNNSSSVDSSSKKGVKVARNKRVLVLDLNLTPFENDLEFLKIGKATTLVDYL* | 193 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev06g3516 | 192 | Gene3D | Classic Zinc Finger | 28 | 113 | - | - | |
Aev06g3516 | 192 | SUPERFAMILY | beta-beta-alpha zinc fingers | 29 | 113 | IPR036236 | - | |
Aev06g3516 | 192 | MobiDBLite | consensus disorder prediction | 120 | 153 | - | - | |
Aev06g3516 | 192 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 31 | 58 | IPR013087 | - | |
Aev06g3516 | 192 | Pfam | C2H2-type zinc finger | 30 | 56 | - | - | |
Aev06g3516 | 192 | Pfam | C2H2-type zinc finger | 91 | 116 | - | - | |
Aev06g3516 | 192 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 33 | 53 | IPR013087 | - | |
Aev06g3516 | 192 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 91 | 118 | IPR013087 | - | |
Aev06g3516 | 192 | SMART | c2h2final6 | 31 | 53 | IPR013087 | - | |
Aev06g3516 | 192 | SMART | c2h2final6 | 91 | 113 | IPR013087 | - | |
Aev06g3516 | 192 | PANTHER | ZINC FINGER PROTEIN ZAT12 | 1 | 180 | - | - | |
Aev06g3516 | 192 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 93 | 113 | IPR013087 | - | |
Aev06g3516 | 192 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 1 | 180 | - | - | |
Aev06g3516 | 192 | MobiDBLite | consensus disorder prediction | 117 | 154 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev06g3516 | Aev-Chr6 | 36097295 | 36097873 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev06g3516 | 1 | 184 | C2H2 Transcription Factor Family | AT2G28710 | 41.489 | 1.17e-31 | 110 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Aev06g3516 | zf-C2H2_6 | 5.8e-10 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev06g3516 | - | - | gmx:100781134 | 215.698 |