Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3503 ATGGCTGCTAGAATGGACATGTCACTCGACGAAATCATCCAGAGGTCCGCCGCCGAGTCATCCGCCGCTCGCCGCCGCCCTAGACCACCGCCTTCAGGCCCCGGCCCCAGCCGCCGCATTCCCGTTCGCGTCTCCTCCTTAACCACGCCCTACTCCATGCCACAGGTGAGAAGGCAAATGTGGCAAACTAGCTATGAAACAAATATGGAAATGGTTATGGATCGCGTTCGTGATGCTGAAGCTGAGAGTGGCACTAAACTCTACATATCAAACTTGGATTATGGGGTTTCTAATGGCGATATTAAGCTGCTGTTTGCAGAAGAGGGTGAATTGAAAAGATACTCCATTCATTATGACAAGAGTGGGAGATCAAAGGGAACGGCAGAAGTTGTCTTTATGAATCAGTCTGATGCTATAGCAGCCATGAGAAAGTACAACAATGTGAAGCTTGATGGAAAACCATTGCAAATTGAGCTTGTTGGAGCAAATTTGGAAGATCCTGCTGATATGCCACTTATTCGAGATGGCATACTGGGAGGAAGACCAAATAATGCCTTTCTCTATGGACAAGGAAGGGTTGAGCATAGGATGTTCTTCAACGGCATTGCAAGCAATCGCCTTCCAAGGGGTCATGGAGGGAACATGCATGTTGGAAGGTTACCCTATGGAGGAGGTCGTGACGAGAATTTTGCGCGTCACCGTCCAAAAGGCCATAGAGAAATGAAGGACCATAGTGGAAAGGTATCCTTCAAAGATCTTGATGAAGAGCTAGACCAGTATCATTCAGAAGCTATGAAACTAGGTAAAAGAGGTGGAAATGGAAGACATGGTTGA 834 0.4748 MAARMDMSLDEIIQRSAAESSAARRRPRPPPSGPGPSRRIPVRVSSLTTPYSMPQVRRQMWQTSYETNMEMVMDRVRDAEAESGTKLYISNLDYGVSNGDIKLLFAEEGELKRYSIHYDKSGRSKGTAEVVFMNQSDAIAAMRKYNNVKLDGKPLQIELVGANLEDPADMPLIRDGILGGRPNNAFLYGQGRVEHRMFFNGIASNRLPRGHGGNMHVGRLPYGGGRDENFARHRPKGHREMKDHSGKVSFKDLDEELDQYHSEAMKLGKRGGNGRHG* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3503 277 Gene3D - 57 276 IPR012677 -
Aev06g3503 277 PANTHER THO COMPLEX SUBUNIT 4A-LIKE ISOFORM X1 1 267 - -
Aev06g3503 277 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 1 267 - -
Aev06g3503 277 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 85 162 IPR000504 GO:0003723
Aev06g3503 277 CDD RRM_THOC4 85 159 - -
Aev06g3503 277 SUPERFAMILY RNA-binding domain, RBD 69 183 IPR035979 GO:0003676
Aev06g3503 277 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 87 155 IPR000504 GO:0003723
Aev06g3503 277 MobiDBLite consensus disorder prediction 1 49 - -
Aev06g3503 277 SMART rrm1_1 86 158 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3503 Aev-Chr6 36014111 36016516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3503 76 159 Eukaryotic Initiation Factors Gene Family AT1G34140 33.333 2.85e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3503 K12881 - gmx:100785926 215.698