Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3461 ATGGAGGATCCTCAAACCCTAAACTCCACAAACTTGTTCCTCTCCGCCACAAACCAACCCTCACTCTCTCTCTCCACCGTCCCTTCCACCGTTCCTCACTCTAAGCTCATCCCCAACACGCGCTTCCTCGTCGACGCTTTCCGCCACGCTGGCACCTTCTCCGTCTCTTACTTCCTCTCCCACTTCCACTCCGACCATTACTCCGGCCTCTCCCCTTCCTGGTCCCGCGGCATCGTGTTCTGCTCCGCCACCACCGCCGCCCTCCTCCGCCGCATCCTCGGCATCCCTGAACGGTTCCTCGTCCCCATCCCGCTCCGCCAGCCTGTCGAAATCGATGGCGCCGAAGTCGTCCTGGTGGATGCTAACCACTGCCCTGGCGCCGTACAGTTCCTCTTCAAGGTCCCCATTGGTGAAGGGAAATTCGAAAGGTACATTCACACAGGTGATTTCCGTTTTTGCGATTCAATGATATCGGAGCCTGAAATTGCTGATTATGTTGGTTGTGATGCTGTGTTCTTGGATACTACTTATTGTAACCCCAAGTTTGTGTTCCCAAAACAAGAGGAGAGCATTGATTACGTGGTCGATGTAGTGGAGAAGGTTTGTGGTGAGTGTGGTGATGATAATAGTGTTTTGTTTCTTGTTGCTACTTATGTTATTGGGAAGGAGAAGATTTTGCTTGAGCTTGCAAGGAGGGTGAAGAGGAAGGTGCATGTTGATGCTAGGAAAATGGAGGTTTTGAAGGTTCTTGGCTATGGGGAGAGTGGCGTGTTTACGGAGGATGGATCAGAGACTAATGTTCATGTTGTTGGGTGGAATGTGTTGGGGGAGACGTGGCCGTATTTCAGACCGAACTTTGTTAGGATGAAGGAGATTATGATTGAGAGAGGGTACTCCAAGGTTGTAGGATTTGTTCCAACTGGATGGACTTATGAAGTGAAGCGCAATAGGTTCGCAGTGAGGTCCAAGGATTCGTTTGAGATTCATCTCGTGCCGTATAGTGAGCATTCCAACTACGAGGAGCTTAGGGAGTATGTGAGGTTTTTGAAGCCGAAGCGTGTTGTTCCAACGGTGGGCTTGGATGTTGAGAAAAGTGATAGTAAACATGCTGACAAAATGAGGAAGTATTTTGCTGGATTGGTTGATGAGATTGCCAATAAGCAGGAGTTTTTAAAGGGATTTCGTCGTGCCAATGGCGAAGTGGATGTCACGGTTGACAAGGATGTTAGTGATGCTCGAAAACTAGGACAAAACATGGAAAAAGAAGTCAAGCTATCCGACTTGGATGGTGAGAAAAGTGTGAACACCGGTATTGTTGTGGATTTGCCCTCTTCTACTGGGGAGCCTTGTACACAAGATCCGGCTTCACTTGATGATGAAGAAAAAGAGAAAATTGTTCAAGAACTTAGATGTTGTTTGCCATCGTGGGTCACTCGAAGCCAGGTTTTAGAGCTGATAAGCGTTTCAGGGAGCAATGTTGTTGAAGCTGTTTCTAATTTTTATGAACGTGAAACTGATTTTCACAAGCAAGTAGTTTCTTCTCAAGCTTCTGTTTCAATTCTCAATGCCTTTCCGTTAGATGACATCATTTCTCTTACAAAAGCATCCCTGAATACAAACAACACTGACAGAAATGTTGATGTTTTTCCAAGCCAAAACTCAAAATTTTCTGCCCTAAGGCATACAGTTCCAAGTCAGATTTCCCCTGCTAAAAGGAATAAAAATAGTGAAAGTAAGCCAAAGAAGAAAGCAAAAGTCAAAGAAAAACCACAATCAAGTGGTTCGAAGCAGTCCACCATAACAAAGTTCTTCAGCAAAGTAATGCCTGTGATGCCTGGTGTTAGTCAATCTGATGATCCTGGATTGAAGCTTGACCAAAGCCCTAAAGCTGAAAACTTGTTGCCTATGGATGTCGGAAAATTGTACAAGGATGAGGTTGATCAGTTCATGCAAATAATAAATGGTGATGAGTCACTAAAAAAGTATGCTGCCACCATAATTGAGAAGACTAAAGGGGATGTTAATAAGGCATTGGATATATATTACTGTAGTTCTGGCAATCTTTGTGAAAATGAAATATCAGTTCAAGCAGAGTGCAACAGTGACAGCCCCTTAGAGAAGAAGAATGTATCGCGTCAATTGAGAGCTATACCTGATACTACTATGCAGAGGGTATTAAAAGACAATGCAATTCATGTAACTCTACCACTTGAGAAATACAATCCTATAGAGCATGCGTGTTGGAGAGAAGGACAGCCTGCACCATATTTACATATTGCGCGAACGTTCAGCCTTCTTGAGGAAGAGAAAGGAAAGATAAAAGCTACTTCAATGTTATGCAATATGTTCAGAAGTTTGTTGGCTTTGTCTCCAGCAGATGTGCTGCCTGCTGTGTATCTATGTACAAACAAAATTGCTGCAGACCATGAAAATACGGAGCTAAATATTGGTGGAAGTATAGTTACTGCAGCACTTGAAGAGGCATGTGGAACAAATCGATCAAAAATAAAGGAGATGTATAACAAATTTGGTGATCTTGGTGATGTTGCACAAGAGTGTCGTCAAACTCAGAGATTGCTTGCACCACCAACACCACTTCTAATTAAGGATGTTTTCTCTGCACTACAAAAGATAAGTGTGCAAACAGGCCACGGAAGCACGTCTCGAAAGAAAGGCATTATGGTTCATCTCATGCGTTCCTGCCGTGAGAAGGAGATTAAGTTTCTTGTTCGGACCTTGGTCCGGAATCTAAGAATTGGGGCAATGCTTAGAACTGTTTTACCTGCACTGGCTCAAGCTGTTGTAATGAATTCTTGCCCTACTGTGCACCAAGAAGGAACTACTGAATTTTTGAAGGAGAAGCTTCAGGTCCTTTCTGTTGAAGTTGTTGAAGCATATAACATACTTCCAAATTTGGATCTCATAGTTCCATCTCTCATGAACAAAGGCATCGACTTTTCAGTTTCAAATTTGTCAATGGTTCCAGGAATCCCAATTAAGCCTATGCTTGCAAAGATCACCAATGGCATTCCCCAAGCATTGAAGCAATTTCAAGATAAGGCATTTACTTGTGAATACAAGTATGATGGTCAGCGAGCTCAAATTCACAGATTAGCTGATGGATCAATTCGTGTTTTTTCAAGAAATGGAGATGAAACAACGTCAAGATTTCCTGATCTGATTGGTATAATTAAGGAATCCTGCAAGCCCGTTGCATTGACTTTCATAATTGATGCAGAAGTTGTTGGTATTGATAGAAAAAATGGAAATAGGATTATGTCTTTCCAGGAGCTTTCTTCGCGTGGAAGAGGAAGTAAAGATACTTTAGTTACTTCAGAGAACATAAAGGTGGACATTTGCATCTTTGCCTTTGACATCATGTTCGCAAATGGAGAGCAGCTATTGGCTTTTCCTCTCCGCTCAAGACGAAAATACCTGAAGGATTTGTTCTATGATGAGAGACCAGGGTATTTTGAATATGCAAAGGAAATAACTATTGAAGCTGATGATGCTTGCGTGACTTGTGAAGCCACATTAGCTAAGATGAATGCTTTCTTGGAGGACGCACATAATTCTTCGTGTGAAGGAATTATGGTGAAAACATTGGATGTTGATGCCGGTTATTCTCCATCAAAGCGTTCTGACAAATGGCTAAAGGTCAAGCGAGATTATGTGGAAGGTTTGAACGATACTCTTGATTTAGTACCAATTGGCGCTTGGCATGGAAATGGAAGGAAAGCTGGATGGTATAGTCCGTTTCTTATGGCATGTTACAATCCCGAAACTGAGGAGTATCAAAGTGTATGCCGTGTGATGTCTGGGTTCTCAGATTCATTTTACATAGAGATGAAAGAATTCTTCTCTGGAGACAAAGTTTTGTCGAAAAAGCCGCCATATTATCGAACAGCAGAGGAGCCTGACATGTGGTTTTGTCCCCAACTTGTTTGGGAGATAAAAGGTGCAGACTTCACAGTGTCTCCTGTTCATCATGCTGCCATTGGTTTAGTTCATCCATCTCGGGGCATCTCGATCAGGTTTCCGAGATTCGTTCGCGGCGTGCCTGACGAACCAAAGAATGTAGTACGGATTCAGATATAG 4098 0.4317 MEDPQTLNSTNLFLSATNQPSLSLSTVPSTVPHSKLIPNTRFLVDAFRHAGTFSVSYFLSHFHSDHYSGLSPSWSRGIVFCSATTAALLRRILGIPERFLVPIPLRQPVEIDGAEVVLVDANHCPGAVQFLFKVPIGEGKFERYIHTGDFRFCDSMISEPEIADYVGCDAVFLDTTYCNPKFVFPKQEESIDYVVDVVEKVCGECGDDNSVLFLVATYVIGKEKILLELARRVKRKVHVDARKMEVLKVLGYGESGVFTEDGSETNVHVVGWNVLGETWPYFRPNFVRMKEIMIERGYSKVVGFVPTGWTYEVKRNRFAVRSKDSFEIHLVPYSEHSNYEELREYVRFLKPKRVVPTVGLDVEKSDSKHADKMRKYFAGLVDEIANKQEFLKGFRRANGEVDVTVDKDVSDARKLGQNMEKEVKLSDLDGEKSVNTGIVVDLPSSTGEPCTQDPASLDDEEKEKIVQELRCCLPSWVTRSQVLELISVSGSNVVEAVSNFYERETDFHKQVVSSQASVSILNAFPLDDIISLTKASLNTNNTDRNVDVFPSQNSKFSALRHTVPSQISPAKRNKNSESKPKKKAKVKEKPQSSGSKQSTITKFFSKVMPVMPGVSQSDDPGLKLDQSPKAENLLPMDVGKLYKDEVDQFMQIINGDESLKKYAATIIEKTKGDVNKALDIYYCSSGNLCENEISVQAECNSDSPLEKKNVSRQLRAIPDTTMQRVLKDNAIHVTLPLEKYNPIEHACWREGQPAPYLHIARTFSLLEEEKGKIKATSMLCNMFRSLLALSPADVLPAVYLCTNKIAADHENTELNIGGSIVTAALEEACGTNRSKIKEMYNKFGDLGDVAQECRQTQRLLAPPTPLLIKDVFSALQKISVQTGHGSTSRKKGIMVHLMRSCREKEIKFLVRTLVRNLRIGAMLRTVLPALAQAVVMNSCPTVHQEGTTEFLKEKLQVLSVEVVEAYNILPNLDLIVPSLMNKGIDFSVSNLSMVPGIPIKPMLAKITNGIPQALKQFQDKAFTCEYKYDGQRAQIHRLADGSIRVFSRNGDETTSRFPDLIGIIKESCKPVALTFIIDAEVVGIDRKNGNRIMSFQELSSRGRGSKDTLVTSENIKVDICIFAFDIMFANGEQLLAFPLRSRRKYLKDLFYDERPGYFEYAKEITIEADDACVTCEATLAKMNAFLEDAHNSSCEGIMVKTLDVDAGYSPSKRSDKWLKVKRDYVEGLNDTLDLVPIGAWHGNGRKAGWYSPFLMACYNPETEEYQSVCRVMSGFSDSFYIEMKEFFSGDKVLSKKPPYYRTAEEPDMWFCPQLVWEIKGADFTVSPVHHAAIGLVHPSRGISIRFPRFVRGVPDEPKNVVRIQI* 1366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3461 1365 MobiDBLite consensus disorder prediction 558 598 - -
Aev06g3461 1365 CDD OBF_DNA_ligase_I 1230 1355 - -
Aev06g3461 1365 Pfam DNA ligase N terminus 755 931 IPR012308 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Aev06g3461 1365 CDD SNM1A-1C-like_MBL-fold 20 180 - -
Aev06g3461 1365 PANTHER DNA LIGASE 4 755 - -
Aev06g3461 1365 Gene3D - 183 336 - -
Aev06g3461 1365 MobiDBLite consensus disorder prediction 558 573 - -
Aev06g3461 1365 Gene3D - 37 358 IPR036866 -
Aev06g3461 1365 SUPERFAMILY Metallo-hydrolase/oxidoreductase 39 359 IPR036866 -
Aev06g3461 1365 SUPERFAMILY Nucleic acid-binding proteins 1230 1356 IPR012340 -
Aev06g3461 1365 TIGRFAM dnl1: DNA ligase I, ATP-dependent (dnl1) 813 1356 IPR000977 GO:0003910|GO:0005524|GO:0071897
Aev06g3461 1365 Pfam DNA repair metallo-beta-lactamase 256 359 IPR011084 -
Aev06g3461 1365 Pfam ATP dependent DNA ligase C terminal region 1247 1351 IPR012309 GO:0003910|GO:0006281|GO:0006310
Aev06g3461 1365 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 957 1223 - -
Aev06g3461 1365 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 4 755 - -
Aev06g3461 1365 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 736 984 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Aev06g3461 1365 Pfam ATP dependent DNA ligase domain 1001 1221 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Aev06g3461 1365 Gene3D DNA ligase/mRNA capping enzyme 1030 1161 - -
Aev06g3461 1365 ProSiteProfiles ATP-dependent DNA ligase family profile. 1112 1259 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Aev06g3461 1365 ProSitePatterns ATP-dependent DNA ligase AMP-binding site. 1025 1033 IPR016059 GO:0003909
Aev06g3461 1365 Gene3D - 1011 1225 - -
Aev06g3461 1365 Gene3D - 734 1003 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Aev06g3461 1365 CDD Adenylation_DNA_ligase_I_Euk 990 1224 - -
Aev06g3461 1365 Gene3D - 1226 1362 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3461 Aev-Chr6 35646694 35655515 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3461 740 1351 Core DNA Replication Machinery Family AT1G08130 40.717 6.45e-161 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3461 - - aip:107635689 2146.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3461 06 35646694 35655515 Aev06g3461 06 35646694 35655515 ECH