Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3444 ATGAAACCTCTTCAAAACCCATTTCCCATTTTCACGTTCTTGTTCATTTGCTTAATCTTAATCAACATTCCAACATCTCTAAATGCGGATACTAGCCAATACACGAGTTGCAGAAACACTTTCAGCTGTGGATCCATCACAGACCTCACGTATCCATTCTGGGGTGAAAGCAGGGGAAAAGATTGCGGTGAGCCTAACTTGGAGATCGCGTGTGATAATGGGGTCCCAAAATTCACCGTCGATTCTGTCACATACAGGATTCTGTCTTGGAACTTGCAATCACAGATTCTCACAGTTGCTAGAGAAGATTATTGGAGTAGTCTCTGTTTAGATGATTACAAAAACAACACCTTGGATAACACAGTGTTTCAATACGATGATGGAAGCGTCGTTAACATATCTCTGTTATACAAATGCAATGATAATGCAAACCCACCTAACCCTTATGTTCCTCTTCAAAACTGCAATCTTGGGGTGTACATCGCTGTGCAAAACATGCCTTATTATGCAGCTTGCACGAATGTTCTTGTTCCTTTTCCGAAGGCCCAAGTTGGAGTTGTTGTTTCTAATAATCCCTCTGCAATTCAGGGGGTGCTGCAAGAGGGTATTGGGTTGAAATGGACTCAGAGTTATGACGAGTGCGATAAATGCTATGGTTCCGATGGAGCGTGTGGCTATGATAGAGGATTCACCTGTTTTTGCAAAGATGGGTCTTCTAGTAAAACTTCTTCATGTTCAGGATTATCGTCCAGGCAGTGGAACTGGAAGATTATAGCTGGAGTTGCATCAGCTGCGGCTTGTGGAGTTGTTTTAATCCTCAGTGTGATTATTTATTGTAATCGCAAGAAGTATTTGAGATTAGCACAAGGGAGGTTAGTCTTTAAGGAAACAGGAACATCTGCTAACCACAATGTTGAGGATTTTATCAATAATTATAGTCTTTTGGCGCAAAAAAGATATAGTTATTCCCAAGTGAAAAAGATCACAAATTCATTTCAAGATAAATTAGGCCAAGGAGGGTACGGGATTGTGTATAAAGGAAGCTTACCTGATGGCCGCCATGTGGCGGTGAAAATGATTAGTGAATCCAGAGGAAGTGGAGAAGAATTCATAAATGAAGTTGCTAGCATTAGTAGAACATCACATGTTAATATCGTCTCACTTTTTGGATTTTGTAGTGAGATGGATAAAAGAGCACTCATATATGAATTAATGCCCAATGGCTCTCTAGATAAGTTCATCTATAAGCAAGGATCTCCCAATGCTATTTGTAATTTGGCTTGGAACACATTGTACCAAATTACGATTAGCATTGCCCGAGGACTAGAATACTTGCATCGTGGATGTAGTACAAGGATTTTGCATCTTGATATCAAACCTCAAAACATTTTGTTGGATGAAGACTTTTGTCCAAAAATTGCTGATTTTGGACTAGCTAAAATTTGCAAAAAGAATGAGAGTATTGTGTCTATACTAGGAACAAGAGGAACACCAGGGTATATAGCACCAGAAGTATTTAGCCGAACATTTGGTGGAGTTTCTCATAAGTCAGATGTATATAGCTATGGAATGTTGATTCTTGAGGTGGTTGGAGGAAGAAAAAACTATGATACTGGAGGGTCAAATACCAGTGAATTATACTTTCCAGATTGGATTTACAAGGATCTTGAGCAGGGCAATATTCCTACCTCGTGTTTGGTTGACACAGAGGAGGAAAATGATATGGTAATGAAGATTACTTTAGTGAGTATGTGGTGTATTCAACTAAAGCCTTCGGATAGACCAACAATGAGTAAAGTAGTGGAGATGTTAGAAGGACCACTTCAATCGGTGCCATATCCTCCAAAGCCTGTCATGAATTCCCCTCAAAAGTCTCTTTTAGAATTTCCAGATATATCTTATGTTAGTAGTGTAAGTGAACAAATTCAATAG 1932 0.3929 MKPLQNPFPIFTFLFICLILINIPTSLNADTSQYTSCRNTFSCGSITDLTYPFWGESRGKDCGEPNLEIACDNGVPKFTVDSVTYRILSWNLQSQILTVAREDYWSSLCLDDYKNNTLDNTVFQYDDGSVVNISLLYKCNDNANPPNPYVPLQNCNLGVYIAVQNMPYYAACTNVLVPFPKAQVGVVVSNNPSAIQGVLQEGIGLKWTQSYDECDKCYGSDGACGYDRGFTCFCKDGSSSKTSSCSGLSSRQWNWKIIAGVASAAACGVVLILSVIIYCNRKKYLRLAQGRLVFKETGTSANHNVEDFINNYSLLAQKRYSYSQVKKITNSFQDKLGQGGYGIVYKGSLPDGRHVAVKMISESRGSGEEFINEVASISRTSHVNIVSLFGFCSEMDKRALIYELMPNGSLDKFIYKQGSPNAICNLAWNTLYQITISIARGLEYLHRGCSTRILHLDIKPQNILLDEDFCPKIADFGLAKICKKNESIVSILGTRGTPGYIAPEVFSRTFGGVSHKSDVYSYGMLILEVVGGRKNYDTGGSNTSELYFPDWIYKDLEQGNIPTSCLVDTEEENDMVMKITLVSMWCIQLKPSDRPTMSKVVEMLEGPLQSVPYPPKPVMNSPQKSLLEFPDISYVSSVSEQIQ* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3444 643 Pfam Wall-associated receptor kinase C-terminal 168 237 IPR032872 -
Aev06g3444 643 PANTHER RUST RESISTANCE KINASE LR10-RELATED 19 634 IPR045874 GO:0004672
Aev06g3444 643 Gene3D Phosphorylase Kinase; domain 1 304 404 - -
Aev06g3444 643 Pfam Protein kinase domain 333 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g3444 643 ProSiteProfiles Protein kinase domain profile. 330 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g3444 643 PANTHER TYROSINE KINASE FAMILY PROTEIN 19 634 - -
Aev06g3444 643 SMART serkin_6 330 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev06g3444 643 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
Aev06g3444 643 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Aev06g3444 643 SUPERFAMILY Protein kinase-like (PK-like) 309 604 IPR011009 -
Aev06g3444 643 Gene3D Transferase(Phosphotransferase) domain 1 405 611 - -
Aev06g3444 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3444 Aev-Chr6 35540424 35543962 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3444 11 628 Receptor kinase-like Gene Family AT1G66910 40.491 1.92e-151 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Aev06g3444 Pkinase 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3444 - - aip:107635702 778.474