Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3370 ATGTTAATGGCAGGATCACCGGTTGTTGGAATCATTGATGCAAAATTTGAAAGTGGTTATTTAGTAACTGTCACAGTAGGTTCAGAGCAGCTTAAAGGAGTGCTTTATCAAGATCCACAAGGCCCTCTGTTGCCTGCATTTCATCAACAAAGCATTATGGCTAAGAGCAACAATGCCTCTACTCCGTTAGGCGTCCAACGTCGCCGACGTCGGAAGAAGTCAGAGATAAAAAGGAGAGATCCTGCTCATCCTAAACCAAACAGAAGTGGCTACAATTTCTTCTTTGCTGAGCAGCATGCAAGGCTAAAGCCACTACACCAAGCCAAGGACAGAGAGATTAGTAGGATCATTGGTGAATTGTGGAACAAGTTAAAAGAGCCTGAAAGATCGGTTTATCAAGAAAAGGCTATAAAGGATAAAGAGAGGTACAAAGCAGAAATGGAAGATTATAGGCAAAAACTGAGAATGAACCAAGTTATAATAAGCGATGCAGTGCCTCTCCAACAAAGATTTCCTGAACCAGACACAACATTGGTTGATGTTGACATAAGATTAGATGATGAGAATGATGCTGCTTCAGGTTCTCCTCTCACTCAAACCCCTGAAGAAAGCAGTTCTGGTGGAAGTGACAATGATATTAATATGGATTATGATGATGCTTCTCCTAATGAAATTGGAATGAGTGCTGAAAATGCATATTTGACTTTGGATAAGGCATCAAAAGAGGCCAATTTTGGGATTCCTCATCAACAGGTTCAGAAGATTGATGAGAGCAAGAATATGTTAGCATTGCTTTAG 798 0.406 MLMAGSPVVGIIDAKFESGYLVTVTVGSEQLKGVLYQDPQGPLLPAFHQQSIMAKSNNASTPLGVQRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHQAKDREISRIIGELWNKLKEPERSVYQEKAIKDKERYKAEMEDYRQKLRMNQVIISDAVPLQQRFPEPDTTLVDVDIRLDDENDAASGSPLTQTPEESSSGGSDNDINMDYDDASPNEIGMSAENAYLTLDKASKEANFGIPHQQVQKIDESKNMLALL* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3370 265 PANTHER HIGH MOBILITY GROUP B PROTEIN 15 6 221 - -
Aev06g3370 265 SMART hmgende2 83 152 IPR009071 -
Aev06g3370 265 SUPERFAMILY HMG-box 72 155 IPR036910 -
Aev06g3370 265 MobiDBLite consensus disorder prediction 188 228 - -
Aev06g3370 265 Pfam HMG (high mobility group) box 84 151 IPR009071 -
Aev06g3370 265 MobiDBLite consensus disorder prediction 55 90 - -
Aev06g3370 265 MobiDBLite consensus disorder prediction 192 212 - -
Aev06g3370 265 Gene3D High mobility group box domain 68 162 IPR036910 -
Aev06g3370 265 CDD HMGB-UBF_HMG-box 84 148 - -
Aev06g3370 265 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 6 221 - -
Aev06g3370 265 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 84 151 IPR009071 -
Aev06g3370 265 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3370 Aev-Chr6 34875929 34877280 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3370 3 183 ARID Transcription Factor Family AT1G04880 65.263 1.73e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Aev06g3370 HMG_box 3.1e-13 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3370 - - gmx:100783284 305.834