Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3368 ATGGCTTCATCACTAGAGGAGCTTCTTGCAAAGGAAGGATTCAGAGGAGGCAGAAGAAGAGTGGCAAGGACTAGATCTTCCTTTCACCACGGCGCTTTAACCGAGCCGCTTTACTCTTTTGAGGAGCAGCAACGAAGACGATCTGTATCAAGTGAAGGAACTGCAACACACAGAACAAAGTCTGATTCAACAAGAAGTGATAATAGCAGGCCAAGAGATAAGCTTTTCTTGCGAGACAAGGTACACGAACGGTTGAAGAATGAATCTGAGAAGAAAAATTCTCCTAACAATGCAAATTCAGGCAGAGGAATTGATAGCAATTCATCAGTGAACATGCCAAGGTATGAGAGGCAAGGTAGTAGCAGGCTTAAAGAAGTGTCTAATGCAAAAAGAGGCAAAGAAAAGTATTCGGATGAACTCGAGGAGAGCGAAAAATTTGGAGAAAGTCCTGTCAAGGATGAAAATTTTGGTAAGATTCATAGCAGAAATTCAGGCATACATATGCATGGAAACTCATACACAAGATCTACTAATAGCAGCAACAAAATTCATGACCATGTTATTCTATCAGCTTCTAATCTTGCTCTTGATGAAGTTGCTATTCAAGCAGTGGTTTCCATTCTAAATGGACACATAAAGCGTTTTCTGAAAGATGAGGATTTTCGGTTCACAATGCGCCACGATTGTTTCTCCTCATTGAATTTCATTGAACTTGAAGAAGAGACCAACACTGAGACCAAAGTCATAAGAAGTCTCGAGCAAGCGATCGAGACCATAGAACAAACTGTTGAGCAATCTATGCCTTCAAAATTCCTTAAAAGAGCCTCAATGCAGCTAAGCATTATCACAGGCTTGAGTTTGAATGATTTGAAGCATGAATTTACATGTGGCATCCCAAATTATAAGTTATCAGCTTGTGCTCATCTTTACCTCAGTGTTGTATATATGATACAAAGAAAGGACAAGGTTTCTGCTAAGCATCTCTTGCAAGTGTTCTGTGATTCGCCTTTTCAGGCAAGAACAATATTGTTGCCTGAACTTTGGGAGAGTCTATTTTCTCCACAACTTTCTCATTTGAAGGCATGGTACAACAAGGAAGCCGGAATTCTAGTAGATTCACCTAGCATAACTAGGAGGCTAAAACTTGTTCAGAAAGTTTATAATGAAAATTTGGATTATGGGACTCAAACTTTTGCTGAATACTACAAAGATTGGCTCACTGAAGGAGTAGAAACTCCAAGTATTCCTTCCATTGGGATTCCATCAGTTTCTTTGTCAGCAAGTCACAAGGGAAGTTCACTTGGTCATTCTTCAGAATCTGCGAGCTCTGCCGAACCGTTCTCACCACAGCCAATGGTCAGCAAGAAGCTGTATGATTCTGTCTTTGGCACCTCCGGTAAAACCGGAGTTTATGAAGGCGAAGATAGTAATAGGGATGAAGATAAATTTGAAGTGTTTTTAAGAGGCTCTTATAGTTCCACTATTGTTAAACAAACATTGACATATGAGTCAACTAAGCTTACAGATCAAGATACTGAAGATTTCACTCAGAGTTCACTAGTTGATACATTTCATCAAAAAGGAACTTCAGTGACAGCTGTAGAGGAATGGAAAGAAAGGAATCTCAGTGATATGCCAAATAAGATAGGGTCTACTCTTGCAGGATCATATTTTCTTAGTATTCCACAGGAATTTCTATGTCCTCTTACTGGAACTGTCTTTGATGAACCAATCACACTAGAAACTGGTCAAACCTATGAAAGAGAAGCCATCAAGGCATGGTTTGAAAAGGGAAACGCGACATGTCCGGTAACCGGAAATACCTTAGAATGTGTAACCATGCCATATACCAACCTCATTTTGAAGCGTTTGATTGATAATTGGAAATCAGAAAGTTTCAATCGCCTTCTGGATTTCGCATCTCAGACATCAGACAATTTGGAAGAACTCAAGTTAAAAAATAGAGATGAGGCTGCTGTTTTCATGTTAGAGAGTTTTATGTCATCTTTGAATGAAGAGGAGAAAACTACTTTTGCTAAGCAACTCATCTCTTTAGGAGCTCTATCATTTCTTTTTAGTAGATTTGAACTTGGAAATGTGGAAGAAAAATCACATGTGGTAGCACTCTTGCTAAATTGTATTGAATCAAACTCTGATTGCATATATAAGATAGCGAAAAATGTAAACAGAAAATGTCTTCTTGAGCTCCTTCACAGCAATGAGGTTACCCCAATAACCAACACAATATTATTGCTCACTGATCTTTTATCAATGAAGAGGAGAAAGGATGTTACTTCCTTCATAAGTAACTTGGTAGGTGAAGATATATTCAAAACATTGCAGATTCTGCAAATGTATCTTGAGAAATCTACTCCACATGAAAAGCCCTTAATTGCTGCTCTGTTGTTACACTTTGATCTACTGGTTGAGCCTAAAAAGTTTAGCATATACAGAGAAGTGGCTGTGAATGCCATTGCTGTGGCACTTGATGCCAGCTTAAATGATGACAAGGCCCGAGCGACGTCTTGCAGAGCCCTTCTAATCTTGTGTGGCCATTTTAACTCCAATGGGAAGATAATGACCAAGACTAGTATCTTAGAAGAAGCAGGTTATAATAACATTGAATCAGAAGTAGAACCTCAAGGCCATGAAAAAGAGGGTGTAACATGTGATGTAACCACTTCACTTGGAGATGATGAAGAAAGGGGAGAAGAATTGCTATTGAACTTGTTAGAGTCACTCATTGGTGATGGAGAAAGTCCATTTTTGAAGAGTTTATGCAGATGTTTGGATTCTAGACACCTCGATTTGGTGATGGCGTGTCTAATAACCGTTACATGGTTGAGTTCCTTGCTCTGTAAGCTATTCAATGTGGGATTGCATCTTCCTGCATTCTTAGCAATCATCTTTCAATTGAAAGGAATCCTTGAAAATGGAGAGCTTGAGCTCAAGACTCTTGCATCCATGTCCTTGCTCAATTTCAGTAAAATATCAGAATGCAAAACTCTTTTGAAGACAATGGCAGAAGATATTGCTCCTCTTCTTCAAAGTCTTGCAGATGTAACATGGACTGCAAAGCAGCTTCATGCCATTGTTGAGTCTGTGGAGAATCTGTAG 3117 0.3914 MASSLEELLAKEGFRGGRRRVARTRSSFHHGALTEPLYSFEEQQRRRSVSSEGTATHRTKSDSTRSDNSRPRDKLFLRDKVHERLKNESEKKNSPNNANSGRGIDSNSSVNMPRYERQGSSRLKEVSNAKRGKEKYSDELEESEKFGESPVKDENFGKIHSRNSGIHMHGNSYTRSTNSSNKIHDHVILSASNLALDEVAIQAVVSILNGHIKRFLKDEDFRFTMRHDCFSSLNFIELEEETNTETKVIRSLEQAIETIEQTVEQSMPSKFLKRASMQLSIITGLSLNDLKHEFTCGIPNYKLSACAHLYLSVVYMIQRKDKVSAKHLLQVFCDSPFQARTILLPELWESLFSPQLSHLKAWYNKEAGILVDSPSITRRLKLVQKVYNENLDYGTQTFAEYYKDWLTEGVETPSIPSIGIPSVSLSASHKGSSLGHSSESASSAEPFSPQPMVSKKLYDSVFGTSGKTGVYEGEDSNRDEDKFEVFLRGSYSSTIVKQTLTYESTKLTDQDTEDFTQSSLVDTFHQKGTSVTAVEEWKERNLSDMPNKIGSTLAGSYFLSIPQEFLCPLTGTVFDEPITLETGQTYEREAIKAWFEKGNATCPVTGNTLECVTMPYTNLILKRLIDNWKSESFNRLLDFASQTSDNLEELKLKNRDEAAVFMLESFMSSLNEEEKTTFAKQLISLGALSFLFSRFELGNVEEKSHVVALLLNCIESNSDCIYKIAKNVNRKCLLELLHSNEVTPITNTILLLTDLLSMKRRKDVTSFISNLVGEDIFKTLQILQMYLEKSTPHEKPLIAALLLHFDLLVEPKKFSIYREVAVNAIAVALDASLNDDKARATSCRALLILCGHFNSNGKIMTKTSILEEAGYNNIESEVEPQGHEKEGVTCDVTTSLGDDEERGEELLLNLLESLIGDGESPFLKSLCRCLDSRHLDLVMACLITVTWLSSLLCKLFNVGLHLPAFLAIIFQLKGILENGELELKTLASMSLLNFSKISECKTLLKTMAEDIAPLLQSLADVTWTAKQLHAIVESVENL* 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3368 1038 PANTHER OS04G0584500 PROTEIN 553 1033 - -
Aev06g3368 1038 PANTHER OS04G0584500 PROTEIN 1 545 - -
Aev06g3368 1038 MobiDBLite consensus disorder prediction 12 156 - -
Aev06g3368 1038 MobiDBLite consensus disorder prediction 40 91 - -
Aev06g3368 1038 MobiDBLite consensus disorder prediction 92 116 - -
Aev06g3368 1038 MobiDBLite consensus disorder prediction 118 156 - -
Aev06g3368 1038 PANTHER OS04G0584500 PROTEIN 553 1033 - -
Aev06g3368 1038 PANTHER OS04G0584500 PROTEIN 1 545 - -
Aev06g3368 1038 CDD RING-Ubox_PUB 565 606 IPR045210 -
Aev06g3368 1038 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 560 634 IPR013083 -
Aev06g3368 1038 SMART Ubox_2 564 628 IPR003613 GO:0004842|GO:0016567
Aev06g3368 1038 Pfam U-box domain 561 631 IPR003613 GO:0004842|GO:0016567
Aev06g3368 1038 SUPERFAMILY ARM repeat 653 1022 IPR016024 -
Aev06g3368 1038 SUPERFAMILY RING/U-box 555 631 - -
Aev06g3368 1038 ProSiteProfiles U-box domain profile. 560 635 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3368 Aev-Chr6 34848898 34853895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3368 549 771 U-box Gene Family AT5G42340 28.462 5.74e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3368 - - gmx:100820501 1259.2