Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3328 ATGGATCAGAACAGCAACAACCTTAACAATAGTGACAATAACTTTAACAACAACGTTGGTGGCAACAATGGAAGTGAGCGAATCATGGTTTGTGATTCGAAAGGCGGCGCCTTTCCGGGTTTTCCACCAAAGAGGAGCATAGCTGAGAGGAGGGGTTTCAATTCCAATGCAGCAAGGATCAACACTGCTAGGTTCAGGACCAATTTCACAACAACAATAGCAACAACAAGTCCTTTTGGTTCTTCGTTTTCTCCTCCTTCTTCTGTAGGAAGATCACCTTGTCTCACTATACCACCTGGTATTAGCCCCACTGCATTACTGGACTCACCCGTCATGCTCCCAAATTCTCAGGCTATGCCTTCGCCCACCACTGGATTTCATTGGTTGAACTCTATCACACTCGAACAAGATAACAATCTGGGTGTTACTAATGGTACTGATTCATTCAAATTCAAGTTCCATGAGGATCAAAATCCTATGCAACCTTACTCTGTCACCTTAAATCAGGTTTCTAGTAATTCTCATATGGTAGAGGGAGGAAATACAGATGATCAACCACTCGTACAAGTTCCACCACCTATCGATTTCTCGTTCCCAGCCGACTTTTTGAATGGACAACCTACGAAAAATATTGATTCTTCATTCTTAGCAGACTTTTCTAAAGGACAGACCACAAAAGATGTTGAATCCTATTTGTACAACGATGTGAAAATGGTAGATTGTCCAATTGTTAATGCTAATAATATTGAGATGCGATCCGATGAAGCCAGTGATGATAGCTTTCTAACGAAAAATGTTGTCAATGGCGAGGATATTGGACAACAACCCCTTTTGGAGGGAGACCAGAGAGAAACATCGCTTGCAACGGGAGTCGCAAGGACCTCAGAGGATGGTTATAATTGGAGAAAGTATGGCCAAAAACAAGTTAAAGGTAGCGAGTATCCGAGGAGCTACTATAAATGTACTCAACCTAATTGTCTGGTCAAGAAGAAGGTGGAACGATCCCATGATGGCCAAATAACCGAAATTATATACAAGGGTAATCATAACCATGCGAAACCACATCTTAGTCGCCGAGCATCAGCAGCTGCTGATGAGATATCTGACATAGGTGAAGCCAATGAAACCTATGCTAAAATTGAGAGCGGGCCGGTCTGGAGAAATGTTCAGGCAGGAGTGAAAGATGTGAAACATAGTTTGGATTGGAAGGTCGGTGGTCAAGAAAGGACACCCTCAACTTCTATTGTGACTGACCTTTCAGATAGTAATAAAGCTAAATCAATATGTATGTTCGAATCGGAGGGCACTCCAGAGCATTCTTCCACACTTGTTGGTCGTGATGGTGATGAAGATGTATCAACTCATGCACTTGAAGATGATGCTGGAGATGAAGAATCAGAGTCAAAAAGAAGGAAAAAAGAGAGCTACTTGGTTGAAACAACTTTGCCTTCTAGAGCTGTTCGGGAGCCTAGAGTGGTGGTCCAAATTGAGAGCGAGGTTGACATACTTGATGACGGTTACCGGTGGCGCAAGTATGGACAGAAGGTCGTCAAAGGAAATCCAAACCCGAGGAGTTACTACAAGTGCACAAGTGCTGGATGTACTGTGAGAAAACATGTGGAAAGGGCTTCACACAATTTGAAATATGTAGTTACTACTTATGAGGGAAAGCATAATCATGAAGTTCCTACTGCTAGAACTAACAATCAGATAAGCTCAAGTGATGGTGGTTTACCTCCCAATGGTCCAAATGGGTCAGTCTCTTTTACATTACCCGGCAGTACCATTATCCCGAAGCGTGAACCTGATCAGGCTCTCGCGCCCCATTTCGATCGAAAACCTGCATTTGGCAGTGACCTTTTCAGGCCTAGTTTGGTTGGAAGCTTTGGTAACAACATGAAGTTTGGCTCCAATCCAATGTGCCAAATGAAGTATCCTTCCTTGAATAGCAGCATACCTTTCGGCTCATATGGACTGAATCCTGACCGTTGTGCCGCACCTCAAGCCGGCTCTATTTCCTCAGTGTTCCCCGACTTTCCAATGCCTCTCCCGTTGAATCTCCCCTCATCCGGAAACTTCTCTCTGGCTGGACTAAACTTCAATGGTGTGAAGCCGATGGGTCCGGTTCCGCCTTTCTTTTCAGGGCAGCAAGTGAAAGATATCGATACCGGATTTCTGAGGCCTAAACAGGAACAGAAGGATGAAACTATATATGGTACATGCTTACCCCAAGTTGATAATGCAAATTCTTCACTCAGTTCATCATCAGCAACACAATCCATTTACCAACATGTCATGCAAAATTTCCCTTCATAA 2316 0.4361 MDQNSNNLNNSDNNFNNNVGGNNGSERIMVCDSKGGAFPGFPPKRSIAERRGFNSNAARINTARFRTNFTTTIATTSPFGSSFSPPSSVGRSPCLTIPPGISPTALLDSPVMLPNSQAMPSPTTGFHWLNSITLEQDNNLGVTNGTDSFKFKFHEDQNPMQPYSVTLNQVSSNSHMVEGGNTDDQPLVQVPPPIDFSFPADFLNGQPTKNIDSSFLADFSKGQTTKDVESYLYNDVKMVDCPIVNANNIEMRSDEASDDSFLTKNVVNGEDIGQQPLLEGDQRETSLATGVARTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQPNCLVKKKVERSHDGQITEIIYKGNHNHAKPHLSRRASAAADEISDIGEANETYAKIESGPVWRNVQAGVKDVKHSLDWKVGGQERTPSTSIVTDLSDSNKAKSICMFESEGTPEHSSTLVGRDGDEDVSTHALEDDAGDEESESKRRKKESYLVETTLPSRAVREPRVVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHNLKYVVTTYEGKHNHEVPTARTNNQISSSDGGLPPNGPNGSVSFTLPGSTIIPKREPDQALAPHFDRKPAFGSDLFRPSLVGSFGNNMKFGSNPMCQMKYPSLNSSIPFGSYGLNPDRCAAPQAGSISSVFPDFPMPLPLNLPSSGNFSLAGLNFNGVKPMGPVPPFFSGQQVKDIDTGFLRPKQEQKDETIYGTCLPQVDNANSSLSSSSATQSIYQHVMQNFPS* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3328 771 MobiDBLite consensus disorder prediction 563 594 - -
Aev06g3328 771 SUPERFAMILY WRKY DNA-binding domain 496 563 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev06g3328 771 Pfam WRKY DNA -binding domain 296 351 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev06g3328 771 Pfam WRKY DNA -binding domain 504 561 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev06g3328 771 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 39 745 IPR044810 GO:0003700
Aev06g3328 771 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 39 745 - -
Aev06g3328 771 MobiDBLite consensus disorder prediction 462 476 - -
Aev06g3328 771 Gene3D WRKY domain 490 556 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev06g3328 771 SMART WRKY_cls 295 353 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev06g3328 771 SMART WRKY_cls 503 562 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev06g3328 771 MobiDBLite consensus disorder prediction 563 593 - -
Aev06g3328 771 MobiDBLite consensus disorder prediction 433 476 - -
Aev06g3328 771 SUPERFAMILY WRKY DNA-binding domain 293 354 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aev06g3328 771 ProSiteProfiles WRKY domain profile. 498 563 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev06g3328 771 MobiDBLite consensus disorder prediction 1 21 - -
Aev06g3328 771 ProSiteProfiles WRKY domain profile. 296 354 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aev06g3328 771 Gene3D WRKY domain 285 355 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3328 Aev-Chr6 34540660 34543993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3328 47 566 WRKY Transcription Factor Family AT5G56270 40.787 4.84e-96 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aev06g3328 WRKY 1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3328 K18835 - gmx:100800211 933.324