Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3321 ATGGAATTCGATGCTTCAATTCCCATCCCTCAAGATGCGATGTGGCAAATGAACTTGAGGTCAAGTGAAACAATGGAACCTGGACCTTATCCTGAGCATCCAGGAGAACCAGATTGTTCATATTACATCAGAACAGGACTTTGTAGATTTGGAGCAACATGTCGATTTAACCATCCTCCTAACAGGAAACTGGCTATTGCCGCTGCACGGATGAAGGGAGAGTTCCCAGAAAGGATAGGGCAGCCAGAATGTCAGTATTATCTGAAGACAGGAACTTGCAAATTTGGGGCCACATGCAAGTTTCATCATCCTAGAGACAAGGCTGGGATTGCTGGAAGAGTTGCTTTAAATATTTTAGGCTATCCACTCCGCCCAAATGAGCCTGAATGCGCTTATTATTTAAGAACTGGACAATGCAAATTTGGGAACACTTGCAAATTCCACCATCCTCAACCAAGTAATATGGTACTTTCAATGCGTGGTTCTCCTGTCTATCCCACTGTCCATTCTCCTACTACACCAGGTCAGCAGTCATATGCAGCAGGAATTACAAATTGGTCTAGTTCGTCCTATATTCCTAGTCCACGCTGGCAAGGCCCTTCGAGTTATGCACCTTTGATTCTACCTCAGGGAGTGGTTTCAGTGCCTGGGTGGAGTGCATACAATGGTCAAATGGGATCAGATAGTGCACAGCAAACAATGGGAAATGGTCAAACATACGGAACTTCTCGTCAAGGTGAAGCATCAAATGCAGGATCCCAAGGAGCATATTCTCAATACCGTTCTGGATCCGTTCCTGTAGGTTTCTATGCGTTGCAGAGAGAGAACATATTTCCTGAGAGACCTGGTCAGCCTGAATGCCAATTTTACATGAAGACTGGAGATTGTAAGTTCGGTGCTGTCTGCCGTTTCCATCATCCACGTGAGAGGCTGATACCTGCTCCTGACTGTCTTTTGAGTCCCATTGGCCTTCCGTTGCGTCCTGGAGAGCCTTTGTGCGTCTTCTACTCGCGTTATGGCATTTGCAAATTTGGCCCAAGTTGCAAGTTTGACCACCCAATGGGAATCTTCACCTACAATATATCTACATCACCCTCTCCCGATACTCCAGGACGGCGACTGTTGGGTTCTTCGTCAGGAACTGCTGCATTAACTTTATCATCGGAAGTACTTGTTGACTCATCAGGCTCATCAAAGCCAAGGAGGCTTTCATTATCAGAGACAAGACAGATTCCTTCCGGTGATGATAACATTGATGATGAGGGATAG 1269 0.4586 MEFDASIPIPQDAMWQMNLRSSETMEPGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPNEPECAYYLRTGQCKFGNTCKFHHPQPSNMVLSMRGSPVYPTVHSPTTPGQQSYAAGITNWSSSSYIPSPRWQGPSSYAPLILPQGVVSVPGWSAYNGQMGSDSAQQTMGNGQTYGTSRQGEASNAGSQGAYSQYRSGSVPVGFYALQRENIFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERLIPAPDCLLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGIFTYNISTSPSPDTPGRRLLGSSSGTAALTLSSEVLVDSSGSSKPRRLSLSETRQIPSGDDNIDDEG* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3321 422 PANTHER PROTEIN PHOSPHATASE RELATED 9 421 - -
Aev06g3321 422 ProSiteProfiles Zinc finger C3H1-type profile. 34 61 IPR000571 GO:0046872
Aev06g3321 422 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 33-RELATED 9 421 - -
Aev06g3321 422 Gene3D - 32 110 - -
Aev06g3321 422 SUPERFAMILY CCCH zinc finger 330 354 IPR036855 GO:0046872
Aev06g3321 422 Gene3D - 111 158 - -
Aev06g3321 422 ProSiteProfiles Zinc finger C3H1-type profile. 124 152 IPR000571 GO:0046872
Aev06g3321 422 ProSiteProfiles Zinc finger C3H1-type profile. 327 355 IPR000571 GO:0046872
Aev06g3321 422 SUPERFAMILY CCCH zinc finger 82 107 IPR036855 GO:0046872
Aev06g3321 422 SUPERFAMILY CCCH zinc finger 127 152 IPR036855 GO:0046872
Aev06g3321 422 ProSiteProfiles Zinc finger C3H1-type profile. 78 106 IPR000571 GO:0046872
Aev06g3321 422 MobiDBLite consensus disorder prediction 391 422 - -
Aev06g3321 422 SUPERFAMILY CCCH zinc finger 38 61 IPR036855 GO:0046872
Aev06g3321 422 MobiDBLite consensus disorder prediction 391 412 - -
Aev06g3321 422 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 127 151 IPR000571 GO:0046872
Aev06g3321 422 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 81 105 IPR000571 GO:0046872
Aev06g3321 422 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 329 354 IPR000571 GO:0046872
Aev06g3321 422 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 283 308 IPR000571 GO:0046872
Aev06g3321 422 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 35 60 IPR000571 GO:0046872
Aev06g3321 422 Gene3D - 273 356 - -
Aev06g3321 422 ProSiteProfiles Zinc finger C3H1-type profile. 281 309 IPR000571 GO:0046872
Aev06g3321 422 SMART c3hfinal6 33 60 IPR000571 GO:0046872
Aev06g3321 422 SMART c3hfinal6 78 105 IPR000571 GO:0046872
Aev06g3321 422 SMART c3hfinal6 281 308 IPR000571 GO:0046872
Aev06g3321 422 SMART c3hfinal6 327 354 IPR000571 GO:0046872
Aev06g3321 422 SMART c3hfinal6 124 151 IPR000571 GO:0046872
Aev06g3321 422 SUPERFAMILY CCCH zinc finger 285 311 IPR036855 GO:0046872
Aev06g3321 422 MobiDBLite consensus disorder prediction 224 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3321 Aev-Chr6 34505174 34509568 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3321 14 420 C2H2 Transcription Factor Family AT3G02830 64.493 2.43e-178 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev06g3321 zf-CCCH 5.1e-09 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3321 - - gmx:100786261 816.224