Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3301 ATGTCACTCTCTCCCTCTCCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCACCGCCTCATTCCTCACCAAAATCGGCCTCGGCTATTCCATAGCCATAGCCCTCGCTTTCCTCGTTCTCCTCTCCACCCTCATCCTCACCTCCTACCTCTGCTGTAACCGTAACCGTAACCGTCATAACCGTAACCATAACCGTCATAACCGTACCAACAACCCCCAAGACGGCGTCGTTTTGCCAAGAATAATCTTCGTTGCGGAAGATGAAGACGAGCACGATAACCCACCGGCAGTGGGGTTAGACCAGAACGTGATAAACTCGTACCCGAGGTTCGAGTTCAGGAGGGACAACAATGGCGGTGGTGTGGGACAGAGTACAACCTGCTCGATTTGTTTGTGCGAGTACAAGGATTCCGAGATGCTGAGGATGATGCCGGAATGTAGGCACTATTTTCATCTCTGTTGTCTCGATGCGTGGTTGAGGCTCAATGGTTCCTGCCCTGTTTGTAGAAACTCGCCGCTTCCGACGCCGCTCTCTACGCCGCTGCAGGAGGTGGTGCCGCTCTCTCAGTATGCTGCTGATAGGAGGAGGCGGTGA 597 0.5444 MSLSPSPSSSSSSSSSSSTASFLTKIGLGYSIAIALAFLVLLSTLILTSYLCCNRNRNRHNRNHNRHNRTNNPQDGVVLPRIIFVAEDEDEHDNPPAVGLDQNVINSYPRFEFRRDNNGGGVGQSTTCSICLCEYKDSEMLRMMPECRHYFHLCCLDAWLRLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYAADRRRR* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3301 198 PANTHER RING-H2 FINGER PROTEIN ATL67 6 198 IPR044289 GO:0016567|GO:0016740
Aev06g3301 198 SMART ring_2 128 169 IPR001841 -
Aev06g3301 198 SUPERFAMILY RING/U-box 127 175 - -
Aev06g3301 198 Pfam Ring finger domain 127 170 IPR001841 -
Aev06g3301 198 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 174 IPR013083 -
Aev06g3301 198 PANTHER RING-H2 FINGER PROTEIN ATL67 6 198 - -
Aev06g3301 198 CDD RING-H2_PA-TM-RING 127 170 - -
Aev06g3301 198 ProSiteProfiles Zinc finger RING-type profile. 128 170 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3301 Aev-Chr6 34365172 34365768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3301 24 189 C3H Transcription Factor Family AT5G07040 41.279 1.14e-34 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3301 - - qsu:112012943 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3301 06 34365172 34365768 Aev02g0238 02 1743946 1744551 PCT